RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
CCNA1-201ENST00000255465 PCDHA7Q9UN72 937 aa12.83□□□□□ -0.36
CCNA1-201ENST00000255465 LRCH1Q9Y2L9 728 aa12.83□□□□□ -0.36
CCNA1-201ENST00000255465 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
CCNA1-201ENST00000255465 ZNF532Q9HCE3 1301 aa12.83□□□□□ -0.36
CCNA1-201ENST00000255465 FAM237AA0A1B0GTK4 181 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 TCRBV5S4A2TA0A5A2 114 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ZNF233A6NK53 670 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 LMNAP02545 664 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ADD2P35612 726 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ARPC4P59998 168 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 FKBP1BP68106 108 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 GSTA3Q16772 222 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 MOB2Q70IA6 237 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 MIGA1Q8NAN2 632 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 SNX27Q96L92 541 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 KRT23Q9C075 422 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 MAGEA13PA6NCF6 341 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 HIP1O00291 1037 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ENTPD3O75355 529 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PLCG2P16885 1265 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PEX5P50542 639 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 NDUFA8P51970 172 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 HUNKP57058 714 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 USP46P62068 366 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PICALMQ13492 652 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PRKG1Q13976 671 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 KRT32Q14532 448 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 MTF1Q14872 753 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 BCL2A1Q16548 175 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 IFT20Q8IY31 132 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 SH2D3CQ8N5H7 860 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 CTNNBL1Q8WYA6 563 aaPredicted RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 SH3GL1Q99961 368 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 PLCB1Q9NQ66 1216 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ARHGEF3Q9NR81 526 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 STIM2Q9P246 746 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 SUCLA2Q9P2R7 463 aaPredicted RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
CCNA1-201ENST00000255465 R3HDM2Q9Y2K5 976 aaKnown RBP12.82□□□□□ -0.36
CCNA1-201ENST00000255465 ZMYM6O95789 1325 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 RAD21O60216 631 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 KDM1AO60341 852 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 CHGBP05060 677 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 CALB2P22676 271 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 CDC25CP30307 473 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 PBX1P40424 430 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 ALDH5A1P51649 535 aaPredicted RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 GSTM4Q03013 218 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 KPNB1Q14974 876 aaKnown RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 CCDC153Q494R4 210 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 TBC1D1Q86TI0 1168 aaPredicted RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 ENDOVQ8N8Q3 282 aaKnown RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 OLFM3Q96PB7 478 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 NR1H4Q96RI1 486 aaPredicted RBP12.81□□□□□ -0.36
CCNA1-201ENST00000255465 RPS6KC1Q96S38 1066 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 IL25Q9H293 177 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 NDUFA13Q9P0J0 144 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 ADAM22Q9P0K1 906 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
CCNA1-201ENST00000255465 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 ACTN4O43707 911 aaKnown RBP12.8□□□□□ -0.36
CCNA1-201ENST00000255465 STRNO43815 780 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 S100A1P23297 94 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 MSH2P43246 934 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 PPP2R2AP63151 447 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 QPCTQ16769 361 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 TRPM8Q7Z2W7 1104 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 PIGWQ7Z7B1 504 aa12.8□□□□□ -0.36
CCNA1-201ENST00000255465 ALDH16A1Q8IZ83 802 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms