RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 UBE4BO95155 1302 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 HS1BP3Q53T59 392 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 CCDC122Q5T0U0 273 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 NOTUMQ6P988 496 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 STAG2Q8N3U4 1231 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 MTMR14Q8NCE2 650 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 HVCN1Q96D96 273 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 CSPG5O95196 566 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 THPOP40225 353 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 ARL1P40616 181 aaPredicted RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 ZNF365Q70YC5 407 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 PCIF1Q9H4Z3 704 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 EPB41L4AQ9HCS5 686 aaPredicted RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 GDAQ9Y2T3 454 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 ZNF189O75820 626 aaPredicted RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 SKILP12757 684 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 NNMTP40261 264 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 RAB27AP51159 221 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 APOBEC3HQ6NTF7 200 aaKnown RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 RIOX2Q8IUF8 465 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 XXYLT1Q8NBI6 393 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 THAP9Q9H5L6 903 aa9.98□□□□□ -0.81
PDE6A-201ENST00000255266 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
PDE6A-201ENST00000255266 CTSHP09668 335 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 RPS6P62753 249 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 MAN2A1Q16706 1144 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 RRAGAQ7L523 313 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 EMC2Q15006 297 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 ZNF699Q32M78 642 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 PCNX4Q63HM2 1172 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 ZSCAN30Q86W11 494 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 PROM2Q8N271 834 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 RNF149Q8NC42 400 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 PIGOQ8TEQ8 1089 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 U2AF1L4Q8WU68 220 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 ZNF541Q9H0D2 1346 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 FAM173BQ6P4H8 233 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 POTEDQ86YR6 584 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 TNIP3Q96KP6 325 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 CNOT6LQ96LI5 555 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 TAAR1Q96RJ0 339 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 MYO1AQ9UBC5 1043 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 PCDHB12Q9Y5F1 795 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 ADORA2AP29274 412 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 TCF7P36402 384 aaPredicted RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 DGKZQ13574 1117 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 ACER1Q8TDN7 264 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 MRPL47Q9HD33 250 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 GUCA1BQ9UMX6 200 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 SCAF8Q9UPN6 1271 aaKnown RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 FAM50BQ9Y247 325 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
PDE6A-201ENST00000255266 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
PDE6A-201ENST00000255266 HEXIM1O94992 359 aaKnown RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CATSPERGQ6ZRH7 1159 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 HAUS6Q7Z4H7 955 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 EFCAB13Q8IY85 973 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 DAGLBQ8NCG7 672 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 APPL2Q8NEU8 664 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 GRK7Q8WTQ7 553 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 TRPV6Q9H1D0 765 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CPVLQ9H3G5 476 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CWC15Q9P013 229 aaKnown RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 AK9Q5TCS8 1911 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 MAGEA1P43355 309 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 PRKCEQ02156 737 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 ITKQ08881 620 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 MAP2K5Q13163 448 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CUL4AQ13619 759 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 PTF1AQ7RTS3 328 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 TXNRD3Q86VQ6 643 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 SECISBP2LQ93073 1101 aaKnown RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 TTC1Q99614 292 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 INCENPQ9NQS7 918 aa9.96□□□□□ -0.81
PDE6A-201ENST00000255266 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.81
PDE6A-201ENST00000255266 VWA5AO00534 786 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 SLC16A4O15374 487 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 SART1O43290 800 aaKnown RBP9.96□□□□□ -0.82
PDE6A-201ENST00000255266 MOCS3O95396 460 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 CCNE1P24864 410 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 RECQLP46063 649 aaPredicted RBP9.96□□□□□ -0.82
PDE6A-201ENST00000255266 ALDH7A1P49419 539 aaKnown RBP9.96□□□□□ -0.82
PDE6A-201ENST00000255266 SV2CQ496J9 727 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 TMCO3Q6UWJ1 677 aa9.96□□□□□ -0.82
PDE6A-201ENST00000255266 CD302Q8IX05 232 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms