RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 TUBGCP6Q96RT7 1819 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 SATB1Q01826 763 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 ETNK1Q9HBU6 452 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 POTECB2RU33 542 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 UCHL3P15374 230 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 PLCG2P16885 1265 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 FLT3P36888 993 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 FNTAP49354 379 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 ADCY2Q08462 1091 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.19■□□□□ 0.343e-7■■■■■ 56.2
SLC6A8-201ENST00000253122 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 NUP188Q5SRE5 1749 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.346e-7■□□□□ 8.9
SLC6A8-201ENST00000253122 EXOC3O60645 756 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 FERP16591 822 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 KRT15P19012 456 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 RBBP5Q15291 538 aaKnown RBP17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 CCHCR1Q8TD31 782 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 KIF9Q9HAQ2 790 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 MCM8Q9UJA3 840 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 LRRD1A4D1F6 860 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 GALCP54803 685 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 GRB10Q13322 594 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 PJA2O43164 708 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 NTSR2O95665 410 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 EEF2P13639 858 aaKnown RBP17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 ACCSLQ4AC99 568 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 NAGPAQ9UK23 515 aa17.18■□□□□ 0.34
SLC6A8-201ENST00000253122 CFAP73A6NFT4 308 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 RASSF10A6NK89 507 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 MYBL1P10243 752 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 BAP1Q92560 729 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 CEP63Q96MT8 703 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 CNOT8Q9UFF9 292 aaKnown RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 12.5
SLC6A8-201ENST00000253122 ELF3P78545 371 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 NPY5RQ15761 445 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 RAB3IPQ96QF0 476 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 DDX23Q9BUQ8 820 aaKnown RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.17■□□□□ 0.347e-11■■■□□ 17.2
SLC6A8-201ENST00000253122 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 UBOX5O94941 541 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 LMNB1P20700 586 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 ADCY8P40145 1251 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 STXBP4Q6ZWJ1 553 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 CD302Q8IX05 232 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 INPP4AQ96PE3 977 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 CHORDC1Q9UHD1 332 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-201ENST00000253122 F8VZ95 297 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 TATDN2Q93075 761 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 IFI35P80217 286 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 LONRF1Q17RB8 773 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 ZNF571Q7Z3V5 609 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 TPCN2Q8NHX9 752 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 FBXO25Q8TCJ0 367 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 HOOK2Q96ED9 719 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 METTL14Q9HCE5 456 aaKnown RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 TNFRSF8P28908 595 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 TMC3Q7Z5M5 1100 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 SRRM1Q8IYB3 904 aaKnown RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 MREGQ8N565 214 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 CELF1Q92879 486 aaKnown RBP17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
SLC6A8-201ENST00000253122 CETN2P41208 172 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 C4orf32Q8N8J7 132 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 EPS8L3Q8TE67 593 aaKnown RBP17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 CALR3Q96L12 384 aaKnown RBP17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 NUDT12Q9BQG2 462 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 FAM129AQ9BZQ8 928 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 KDM4CQ9H3R0 1056 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
SLC6A8-201ENST00000253122 RASSF9O75901 435 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms