RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 POLD1P28340 1107 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 CYB5D1Q6P9G0 228 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 PARP9Q8IXQ6 854 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 CCDC105Q8IYK2 499 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 HOOK2Q96ED9 719 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 RUSC1Q9BVN2 902 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 ANO3Q9BYT9 981 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 THAP2Q9H0W7 228 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 VCPKMTQ9H867 229 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 PLCB1Q9NQ66 1216 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
SGPP1-201ENST00000247225 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 GNA14O95837 355 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 MARCKSL1P49006 195 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 ZCWPW2Q504Y3 356 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 EPS8L3Q8TE67 593 aaKnown RBP18.31■□□□□ 0.52
SGPP1-201ENST00000247225 MTFR1LQ9H019 292 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 IGSF9BQ9UPX0 1349 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 CHUKO15111 745 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 TTLL1O95922 423 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 CFBP00751 764 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 TMEM119Q4V9L6 283 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 SEMA4AQ9H3S1 761 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 L3MBTL1Q9Y468 752 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 SCTRP47872 440 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 CLNS1AP54105 237 aaKnown RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 MAP2K1Q02750 393 aaPredicted RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 CUL1Q13616 776 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 CAPN12Q6ZSI9 719 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 POP1Q99575 1024 aaKnown RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
SGPP1-201ENST00000247225 INTS9Q9NV88 658 aaKnown RBP18.3■□□□□ 0.52
SGPP1-201ENST00000247225 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 TMC3Q7Z5M5 1100 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 ZFPM1Q8IX07 1006 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 AIPL1Q9NZN9 384 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 SERPINB13Q9UIV8 391 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 ZNF142P52746 1687 aaPredicted RBP18.29■□□□□ 0.52
SGPP1-201ENST00000247225 GOLGA6L10A0A0M3HER8 536 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 CALCAP01258 141 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 ECHS1P30084 290 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 NFIAQ12857 509 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 TNIP1Q15025 636 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 LRRC34Q8IZ02 419 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 TPX2Q9ULW0 747 aaKnown RBP18.29■□□□□ 0.52
SGPP1-201ENST00000247225 A6NNZ2 444 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 TISP43B9A030 160 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 CALUO43852 315 aaPredicted RBP18.29■□□□□ 0.52
SGPP1-201ENST00000247225 EXOC3O60645 756 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 TUBB8Q3ZCM7 444 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 SEPT14Q6ZU15 432 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 SLC24A3Q9HC58 644 aa18.29■□□□□ 0.52
SGPP1-201ENST00000247225 ZBTB5O15062 677 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 TRAPPC3O43617 180 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 FSBPO95073 299 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 GIT2Q14161 759 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 HP1BP3Q5SSJ5 553 aaPredicted RBP18.28■□□□□ 0.52
SGPP1-201ENST00000247225 ZNF572Q7Z3I7 529 aaPredicted RBP18.28■□□□□ 0.52
SGPP1-201ENST00000247225 KIAA0825Q8IV33 1275 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 F8VZ95 297 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 ASPRV1Q53RT3 343 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 C2CD6Q53TS8 623 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 SLC20A1Q8WUM9 679 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 KRT35Q92764 455 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 FAM84AQ96KN4 292 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 MYH3P11055 1940 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 EZRP15311 586 aaKnown RBP18.28■□□□□ 0.52
SGPP1-201ENST00000247225 TM4SF1P30408 202 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 CCDC197Q8NCU1 140 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 SAMD15Q9P1V8 674 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
SGPP1-201ENST00000247225 SPOPO43791 374 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
SGPP1-201ENST00000247225 SSTR3P32745 418 aaPredicted RBP18.27■□□□□ 0.52
SGPP1-201ENST00000247225 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 ANKRD20A8PQ5CZ79 823 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 NT5DC3Q86UY8 548 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 ERMNQ8TAM6 284 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 LNX1Q8TBB1 728 aaPredicted RBP18.27■□□□□ 0.52
SGPP1-201ENST00000247225 CHMP6Q96FZ7 201 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 XPO6Q96QU8 1125 aaKnown RBP18.27■□□□□ 0.52
SGPP1-201ENST00000247225 EDEM3Q9BZQ6 932 aa18.27■□□□□ 0.52
SGPP1-201ENST00000247225 UBE2TQ9NPD8 197 aaPredicted RBP18.27■□□□□ 0.52
SGPP1-201ENST00000247225 GOLGA8IPA6NC78 632 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 GOLGA8JA6NMD2 632 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 PMS2P54278 862 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 RHBDL3P58872 404 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms