RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 AOC3Q16853 763 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 KIAA1755Q5JYT7 1200 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 TPCN2Q8NHX9 752 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 CASKIN2Q8WXE0 1202 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 PARVGQ9HBI0 331 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 SEL1LQ9UBV2 794 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 ESYT3A0FGR9 886 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 H0YIN7 160 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 ZBTB48P10074 688 aaPredicted RBP23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 TTC31Q49AM3 519 aaPredicted RBP23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 GJB7Q6PEY0 223 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 ACTRT1Q8TDG2 376 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 ZIM3Q96PE6 472 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 FIZ1Q96SL8 496 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 TMX2Q9Y320 296 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 GCOM1H8Y6P7 765 aaPredicted RBP23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 RAD51CO43502 376 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 GFPT2O94808 682 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 H2AFZP0C0S5 128 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 FAM153BP0C7A2 387 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 POLR2MP0CAP2 368 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 ZNF131P52739 623 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 FAM153CQ494X1 144 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 SLC30A10Q6XR72 485 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 H2AFVQ71UI9 128 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 FAM153AQ9UHL3 310 aa23.6■■□□□ 1.37
SH2D3A-201ENST00000245908 SHTN1A0MZ66 631 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 DDX3XO00571 662 aaKnown RBP eCLIP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 PLSCR1O15162 318 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 TTMPQ5BVD1 217 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 SLFN11Q7Z7L1 901 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 IQCKQ8N0W5 287 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 SCFD2Q8WU76 684 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 IFT81Q8WYA0 676 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 ZNF219Q9P2Y4 722 aaPredicted RBP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 CHMP2AO43633 222 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 HSPA1LP34931 641 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 STAT1P42224 750 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 RNASE9P60153 205 aaKnown RBP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 ZC2HC1CQ53FD0 456 aaPredicted RBP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 DNAAF5Q86Y56 855 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 ACER1Q8TDN7 264 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 WHAMMQ8TF30 809 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 ARL8AQ96BM9 186 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 IKZF4Q9H2S9 585 aa23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 RANBP17Q9H2T7 1088 aaKnown RBP23.59■■□□□ 1.37
SH2D3A-201ENST00000245908 EIF1ADQ8N9N8 165 aaKnown RBP23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 CCDC43Q96MW1 224 aaKnown RBP23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 GOLPH3Q9H4A6 298 aa23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 EHMT1Q9H9B1 1298 aa23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 GOPCQ9HD26 462 aa23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 LOXHD1Q8IVV2 1947 aa23.58■■□□□ 1.37
SH2D3A-201ENST00000245908 ZBTB39O15060 712 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 GAS7O60861 476 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 NPEPPSP55786 919 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 ZNF720Q7Z2F6 126 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 OLIG1Q8TAK6 271 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 LMBR1Q8WVP7 490 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 CALR3Q96L12 384 aaKnown RBP23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 DMAC2Q9NW81 257 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 KCND2Q9NZV8 630 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 ODF2LQ9ULJ1 636 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 STXBP5LQ9Y2K9 1186 aa23.58■■□□□ 1.36
SH2D3A-201ENST00000245908 FMO5P49326 533 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 IRAK1P51617 712 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CEP55Q53EZ4 464 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CFAP58Q5T655 872 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 STXBP4Q6ZWJ1 553 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 SLC30A5Q8TAD4 765 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 NACC1Q96RE7 527 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CAPS2Q9BXY5 557 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 PSME4Q14997 1843 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CEP104O60308 925 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 EVI5O60447 810 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 VIL1P09327 827 aaKnown RBP23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 GUCY2CP25092 1073 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 SOX5P35711 763 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 SKOR1P84550 965 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CCDC174Q6PII3 467 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 CD302Q8IX05 232 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 KLHL7Q8IXQ5 586 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 U2AF1L4Q8WU68 220 aaKnown RBP23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 STK33Q9BYT3 514 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 WDR11Q9BZH6 1224 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 PLEKHA4Q9H4M7 779 aa23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 SUCLA2Q9P2R7 463 aaPredicted RBP23.57■■□□□ 1.36
SH2D3A-201ENST00000245908 F8VZ95 297 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 PGRMC1O00264 195 aaKnown RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 COG2Q14746 738 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 HS2ST1Q7LGA3 356 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 METTL13Q8N6R0 699 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 LNX1Q8TBB1 728 aaPredicted RBP23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 C7orf43Q8WVR3 580 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 PPM1EQ8WY54 764 aa23.56■■□□□ 1.36
SH2D3A-201ENST00000245908 PIK3R5Q8WYR1 880 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms