RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 FAM53CQ9NYF3 392 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 HSPA1LP34931 641 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MFAP3P55082 362 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MEA1Q16626 185 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 KLHDC7AQ5VTJ3 777 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CHRNA3P32297 505 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 PBX1P40424 430 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 PDIA5Q14554 519 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 FAM102BQ5T8I3 360 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 COPB2P35606 906 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 CAPRIN2Q6IMN6 1127 aaKnown RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 NT5C1BQ96P26 610 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TRIM4Q9C037 500 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 ARHGEF10LQ9HCE6 1279 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 C1orf112Q9NSG2 853 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TXNDC16Q9P2K2 825 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 DBR1Q9UK59 544 aaKnown RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 RASA4BC9J798 803 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 RASA4O43374 803 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 EVI5O60447 810 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 FTLP02792 175 aaPredicted RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 PDHA1P08559 390 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 NT5C2P49902 561 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 ITIH3Q06033 890 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 BFSP1Q12934 665 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 IWS1Q96ST2 819 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 MAPK13O15264 365 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 MXI1P50539 228 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 SNAP25P60880 206 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 CFAP157Q5JU67 520 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TRPM8Q7Z2W7 1104 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TEKT1Q969V4 418 aa11.87□□□□□ -0.51
CCDC170-201ENST00000239374 CALR3Q96L12 384 aaKnown RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
CCDC170-201ENST00000239374 MYO5BQ9ULV0 1848 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 TRIM49P0CI25 452 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 TRIM49CP0CI26 452 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 HOXA13P31271 388 aaPredicted RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 PHBP35232 272 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 POLE2P56282 527 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 CENPPQ6IPU0 288 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 SLC35G2Q8TBE7 412 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 SCTRP47872 440 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 GPC5P78333 572 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 KIF2BQ8N4N8 673 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 NOD2Q9HC29 1040 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 DHX34Q14147 1143 aaKnown RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 GLG1Q92896 1179 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 AGTP01019 485 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 PDHBP11177 359 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 CD19P15391 556 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 DNAAF5Q86Y56 855 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
CCDC170-201ENST00000239374 HEMGNQ9BXL5 484 aa11.86□□□□□ -0.51
CCDC170-201ENST00000239374 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SOX5P35711 763 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SKOR1P84550 965 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 PLCB4Q15147 1175 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 INTUQ9ULD6 942 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 ZBTB5O15062 677 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SLC29A2Q14542 456 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 CCDC110Q8TBZ0 833 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SYN2Q92777 582 aaPredicted RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 TEKT3Q9BXF9 490 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 OPHN1O60890 802 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms