RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 SCFD2Q8WU76 684 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 CENPTQ96BT3 561 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
DDX1-201ENST00000233084 ADAM7Q9H2U9 754 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 KANSL2Q9H9L4 492 aa17.13■□□□□ 0.33
DDX1-201ENST00000233084 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
DDX1-201ENST00000233084 LIN7AO14910 233 aaPredicted RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 FERP16591 822 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 TBC1D25Q3MII6 688 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 ADAT2Q7Z6V5 191 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 MYH2Q9UKX2 1941 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 SSU72P8A0A1W2PR75 194 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 LRRD1A4D1F6 860 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 LGR5O75473 907 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 COPS2P61201 443 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 POLR2FP61218 127 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 RAPGEF1Q13905 1077 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 MAN2A1Q16706 1144 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 SLC5A9Q2M3M2 681 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 KIAA0895Q8NCT3 520 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 NKX1-2Q9UD57 310 aaPredicted RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 PGRMC1O00264 195 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 PRDX5P30044 214 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 PDCD2Q16342 344 aaPredicted RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 ANO7Q6IWH7 933 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 HOOK3Q86VS8 718 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 FMO2Q99518 471 aa17.12■□□□□ 0.33
DDX1-201ENST00000233084 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 PPP1R1BQ9UD71 204 aaPredicted RBP17.12■□□□□ 0.33
DDX1-201ENST00000233084 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 RGS16O15492 202 aaPredicted RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 PPP1R15BQ5SWA1 713 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 ESR2Q92731 530 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 FGFR1OP2Q9NVK5 253 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 FER1L6Q2WGJ9 1857 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 GOLGA6L10A0A0M3HER8 536 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 COPB2P35606 906 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 RANBP1P43487 201 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 MMP13P45452 471 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 ROR2Q01974 943 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 RNASELQ05823 741 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 UBAP2Q5T6F2 1119 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 METTL13Q8N6R0 699 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 FAM133AQ8N9E0 248 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 EIF1ADQ8N9N8 165 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.338e-8■■■□□ 18.2
DDX1-201ENST00000233084 IQCDQ96DY2 449 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 NSRP1Q9H0G5 558 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 UTP11Q9Y3A2 253 aaKnown RBP17.11■□□□□ 0.33
DDX1-201ENST00000233084 C2CD2Q9Y426 696 aa17.11■□□□□ 0.33
DDX1-201ENST00000233084 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 SNX3O60493 162 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 SERPING1P05155 500 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 NSUN4Q96CB9 384 aaKnown RBP17.1■□□□□ 0.33
DDX1-201ENST00000233084 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
DDX1-201ENST00000233084 EYA3Q99504 573 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
DDX1-201ENST00000233084 PIM2Q9P1W9 311 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 HIP1RO75146 1068 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 GRIK5Q16478 980 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 SLC18A3Q16572 532 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 DAAM2Q86T65 1068 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
DDX1-201ENST00000233084 SYT15Q9BQS2 421 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 RAB17Q9H0T7 212 aa17.1■□□□□ 0.33
DDX1-201ENST00000233084 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 SCG2P13521 617 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 MECOMQ03112 1051 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 DRAXINQ8NBI3 349 aaPredicted RBP17.09■□□□□ 0.33
DDX1-201ENST00000233084 EPAS1Q99814 870 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■■□□□ 14.1
DDX1-201ENST00000233084 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
DDX1-201ENST00000233084 POLE2P56282 527 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 DYMQ7RTS9 669 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 B4GALNT2Q8NHY0 566 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 PBKQ96KB5 322 aa17.09■□□□□ 0.33
DDX1-201ENST00000233084 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms