RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 CCDC28BQ9BUN5 200 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 MMADHCQ9H3L0 296 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 NOB1Q9ULX3 412 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 STAP1Q9ULZ2 295 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 TNRQ92752 1358 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 A0A087WUV0 522 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 RHOBTB3O94955 611 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RAP1GAPP47736 663 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 PTGES3Q15185 160 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 HABP4Q5JVS0 413 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 PADI6Q6TGC4 694 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CEP70Q8NHQ1 597 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RBM17Q96I25 401 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 CNBD2Q96M20 576 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 NOC4LQ9BVI4 516 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 SCHIP1Q9P0W5 487 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 ZRANB1Q9UGI0 708 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 NCAM2O15394 837 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ITGB3BPQ13352 177 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 DHX58Q96C10 678 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CEP19Q96LK0 163 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 OSBPL10Q9BXB5 764 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 TRIM8Q9BZR9 551 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 UBA5Q9GZZ9 404 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 TMEM245Q9H330 911 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 PAG1Q9NWQ8 432 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CFAP99D6REC4 459 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 NR4A1P22736 598 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ZMYND11Q15326 602 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 NCAPH2Q6IBW4 605 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ZNF513Q8N8E2 541 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 RILPQ96NA2 401 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ING3Q9NXR8 418 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RWDD3Q9Y3V2 267 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RIPOR2Q9Y4F9 1068 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 HOXD10P28358 340 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 GCKP35557 465 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RPL3P39023 403 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 ADCY8P40145 1251 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 SLC1A4P43007 532 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 HNMTP50135 292 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 DNAL1Q4LDG9 190 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CCDC157Q569K6 752 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 UGT3A1Q6NUS8 523 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CCDC105Q8IYK2 499 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ZNF579Q8NAF0 562 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 C2orf40Q9H1Z8 148 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 AMACRQ9UHK6 382 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 PUF60Q9UHX1 559 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 UBXN8O00124 270 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 PGRMC1O00264 195 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 CDC27P30260 824 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 TUFMP49411 452 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 TYRO3Q06418 890 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 JADE1Q6IE81 842 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ANKS3Q6ZW76 656 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 FKBP9P1Q75LS8 142 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 NT5DC4Q86YG4 428 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ABI1Q8IZP0 508 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 ELMOD1Q8N336 334 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 DCLK2Q8N568 766 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 BRD8Q9H0E9 1235 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 POLR3EQ9NVU0 708 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 VPS51Q9UID3 782 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 IFNA14P01570 189 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 KIAA1755Q5JYT7 1200 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 MTHFD1LQ6UB35 978 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 BBS7Q8IWZ6 715 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CCDC197Q8NCU1 140 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CLEC4MQ9H2X3 399 aaPredicted RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 FANCEQ9HB96 536 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 UBN1Q9NPG3 1134 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 IRAK4Q9NWZ3 460 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 LNPEPQ9UIQ6 1025 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 RPL26L1Q9UNX3 145 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 APOBEC2Q9Y235 224 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 MINDY4BA8MYZ0 360 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 CNTFP26441 200 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 SNX29Q8TEQ0 813 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 PPWD1Q96BP3 646 aaKnown RBP5.64□□□□□ -1.51
KRR1-201ENST00000229214 ZNF148Q9UQR1 794 aa5.64□□□□□ -1.51
KRR1-201ENST00000229214 SLCO1B7G3V0H7 640 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 BACH1O14867 736 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 ERCC2P18074 760 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 KPNA1P52294 538 aaPredicted RBP5.63□□□□□ -1.51
KRR1-201ENST00000229214 TGM3Q08188 693 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 NAALADL2Q58DX5 795 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 GPR158Q5T848 1215 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 PDXDC2PQ6P474 469 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 CSGALNACT2Q8N6G5 542 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 ENKURQ8TC29 256 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 FMO2Q99518 471 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 STN1Q9H668 368 aaKnown RBP5.63□□□□□ -1.51
KRR1-201ENST00000229214 CEP72Q9P209 647 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 HPCAL4Q9UM19 191 aa5.63□□□□□ -1.51
KRR1-201ENST00000229214 NOTCH3Q9UM47 2321 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms