RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SLC16A3O15427 465 aaKnown RBP27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 APBA1Q02410 837 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 SPIRE1Q08AE8 756 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 RAD51AP2Q09MP3 1159 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 KLHL30Q0D2K2 578 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 KNOP1Q1ED39 458 aaKnown RBP27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 ARSHQ5FYA8 562 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 GBP6Q6ZN66 633 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 SALL4Q9UJQ4 1053 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 UNCXA6NJT0 531 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L15C9J2P7 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L13C9JLJ4 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L11C9JVI0 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L18D6R9N7 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L22D6RA61 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L17D6RBQ6 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L19D6RCP7 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L20D6RJB6 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 MED24O75448 989 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 MYBL2P10244 700 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 TAL1P17542 331 aaPredicted RBP27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 RPL13P26373 211 aaKnown RBP27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 SREBF1P36956 1147 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 GGCXP38435 758 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L24Q0WX57 530 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 KCNH2Q12809 1159 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 PPIL2Q13356 520 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 C8orf74Q6P047 294 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 USP17L6PQ6QN14 398 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 EIF1ADQ8N9N8 165 aaKnown RBP27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 SH3GL2Q99962 352 aa27.25■■□□□ 1.95
RUNDC3A-201ENST00000225441 AGPSO00116 658 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 CXCL11O14625 94 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 IRF6O14896 467 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 FKBP1BP68106 108 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 PPFIA1Q13136 1202 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 GIT2Q14161 759 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 MEI1Q5TIA1 1274 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 DRC1Q96MC2 740 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 POLR3CQ9BUI4 534 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 SLC38A10Q9HBR0 1119 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 ARMCX3Q9UH62 379 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 PTPRFP10586 1907 aa27.24■■□□□ 1.95
RUNDC3A-201ENST00000225441 SHOX2O60902 331 aaPredicted RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 CYP3A4P08684 503 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 CATSPERGQ6ZRH7 1159 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 NELFCDQ8IXH7 590 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 FAM76AQ8TAV0 307 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 TBC1D5Q92609 795 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 DMGDHQ9UI17 866 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 KCNH4Q9UQ05 1017 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 PARP14Q460N5 1801 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 ZNF536O15090 1300 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 A0A0G2JLL6 359 aaPredicted RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 GTPBP10A4D1E9 387 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 PHACTR2O75167 634 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 ZMYND10O75800 440 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 AFPP02771 609 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 ICAM1P05362 532 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 FDX1P10109 184 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 NR2F2P24468 414 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 NAP1L1P55209 391 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 SND1Q7KZF4 910 aaKnown RBP eCLIP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 PRRT2Q7Z6L0 340 aaPredicted RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 CATSPER3Q86XQ3 398 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 OPTNQ96CV9 577 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 GBA2Q9HCG7 927 aaPredicted RBP27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 GDF3Q9NR23 364 aa27.23■■□□□ 1.95
RUNDC3A-201ENST00000225441 MYH10P35580 1976 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 GAP43P17677 238 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 PRKCIP41743 596 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 RAPGEF1Q13905 1077 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 NFIL3Q16649 462 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 CHADLQ6NUI6 762 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 FGFBP2Q9BYJ0 223 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 TYW1Q9NV66 732 aaKnown RBP27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 TBC1D7Q9P0N9 293 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 DAAM1Q9Y4D1 1078 aa27.22■■□□□ 1.95
RUNDC3A-201ENST00000225441 LOC285556D6RIA3 1793 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 SPDYE3A6NKU9 549 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 OPLAHO14841 1288 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 GFPT2O94808 682 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 SLC20A2Q08357 652 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 ATG4CQ96DT6 458 aa27.21■■□□□ 1.95
RUNDC3A-201ENST00000225441 ZBED4O75132 1171 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 PALMO75781 387 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 CELF2O95319 508 aaKnown RBP27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 DSG3P32926 999 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 COG2Q14746 738 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 PROCA1Q8NCQ7 364 aaPredicted RBP27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 SLC10A4Q96EP9 437 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 INTUQ9ULD6 942 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 CCPG1Q9ULG6 757 aa27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 MRPL11Q9Y3B7 192 aaKnown RBP27.2■■□□□ 1.95
RUNDC3A-201ENST00000225441 RLFQ13129 1914 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 GOLGA6CA6NDK9 693 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 PIK3CDO00329 1044 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 VWA5AO00534 786 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 PPFIA4O75335 1185 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 GOLGA6DP0CG33 693 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms