RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
TGFB1-201ENST00000221930 CAVIN3Q969G5 261 aa16.69■□□□□ 0.26
TGFB1-201ENST00000221930 GDF3Q9NR23 364 aa16.69■□□□□ 0.26
TGFB1-201ENST00000221930 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 TBCAO75347 108 aaKnown RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 IRAK1P51617 712 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 UBXN2AP68543 259 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 RRP1BQ14684 758 aaKnown RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 SH2D3CQ8N5H7 860 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 SLC35C1Q96A29 364 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 CCDC43Q96MW1 224 aaKnown RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 TDRD3Q9H7E2 651 aaKnown RBP16.68■□□□□ 0.26
TGFB1-201ENST00000221930 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 TBX3O15119 743 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 RAD51CO43502 376 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 PPFIA4O75335 1185 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 EPHA7Q15375 998 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 RPS6KA1Q15418 735 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 TPH2Q8IWU9 490 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 USP38Q8NB14 1042 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 CASKIN2Q8WXE0 1202 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 SERPINA10Q9UK55 444 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 SYNPO2Q9UMS6 1093 aa16.68■□□□□ 0.26
TGFB1-201ENST00000221930 TTC36A6NLP5 189 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 BMP3P12645 472 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
TGFB1-201ENST00000221930 PPFIA1Q13136 1202 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 EFCAB13Q8IY85 973 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 TYW1Q9NV66 732 aaKnown RBP16.67■□□□□ 0.26
TGFB1-201ENST00000221930 OPA1O60313 960 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 SHOX2O60902 331 aaPredicted RBP16.67■□□□□ 0.26
TGFB1-201ENST00000221930 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 TAF4BQ92750 862 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 AP1M1Q9BXS5 423 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 CAPS2Q9BXY5 557 aa16.67■□□□□ 0.26
TGFB1-201ENST00000221930 GOLGA8KD6RF30 607 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 TGFB1I1O43294 461 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 CEP104O60308 925 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 CFBP00751 764 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
TGFB1-201ENST00000221930 ECE1P42892 770 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 COG2Q14746 738 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 DACT2Q5SW24 774 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 ALS2CLQ60I27 953 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 SIX2Q9NPC8 291 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
TGFB1-201ENST00000221930 GBP6Q6ZN66 633 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 MYCT1Q8N699 235 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 ZNF233A6NK53 670 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 TMCO5BA8MYB1 307 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 ECE2O60344 883 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 GFPT2O94808 682 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 KIF4AO95239 1232 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
TGFB1-201ENST00000221930 ATP1A2P50993 1020 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 GNGT1P63211 74 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 PAK2Q13177 524 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 BIRC2Q13490 618 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 SLC16A10Q8TF71 515 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 GMCL1Q96IK5 515 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
TGFB1-201ENST00000221930 SLC26A4O43511 780 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 C21orf2O43822 256 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 LRRC57Q8N9N7 239 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 BZW2Q9Y6E2 419 aaKnown RBP16.65■□□□□ 0.26
TGFB1-201ENST00000221930 ATRNL1Q5VV63 1379 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 FLOT1O75955 427 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 SLITRK3O94933 977 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 EYA4O95677 639 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 CIITAP33076 1130 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 CCT5P48643 541 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 NNTQ13423 1086 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 IQCKQ8N0W5 287 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
TGFB1-201ENST00000221930 IGLV3-22A0A075B6J6 115 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 FAM13AO94988 1023 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 PPARDQ03181 441 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 BMT2Q1RMZ1 405 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 DDX42Q86XP3 938 aaKnown RBP eCLIP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 BCAS4Q8TDM0 211 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 U2AF1L4Q8WU68 220 aaKnown RBP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 PIK3R5Q8WYR1 880 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 HSD17B14Q9BPX1 270 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms