RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 TLR9Q9NR96 1032 aa17.9■□□□□ 0.46
NME3-201ENST00000219302 AAASQ9NRG9 546 aa17.9■□□□□ 0.46
NME3-201ENST00000219302 TBC1D22BQ9NU19 505 aa17.9■□□□□ 0.46
NME3-201ENST00000219302 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
NME3-201ENST00000219302 TMEM161AQ9NX61 479 aa17.9■□□□□ 0.46
NME3-201ENST00000219302 USP15Q9Y4E8 981 aaPredicted RBP17.9■□□□□ 0.46
NME3-201ENST00000219302 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
NME3-201ENST00000219302 ESYT2A0FGR8 921 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 FSCN2O14926 492 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 MRE11P49959 708 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 RBM10P98175 930 aaKnown RBP17.89■□□□□ 0.45
NME3-201ENST00000219302 KCNC3Q14003 757 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 PKN1Q16512 942 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 DUSP6Q16828 381 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 SPOUT1Q5T280 376 aaKnown RBP17.89■□□□□ 0.45
NME3-201ENST00000219302 ZNF746Q6NUN9 644 aaPredicted RBP17.89■□□□□ 0.45
NME3-201ENST00000219302 COLGALT1Q8NBJ5 622 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 SUSD6Q92537 303 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 OSMRQ99650 979 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
NME3-201ENST00000219302 VTNP04004 478 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 FGFR1P11362 822 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 CIITAP33076 1130 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 PDE12Q6L8Q7 609 aaKnown RBP17.88■□□□□ 0.45
NME3-201ENST00000219302 TMEM184AQ6ZMB5 413 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 TRIM67Q6ZTA4 783 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 SKAP1Q86WV1 359 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 LINC01465Q8N7H1 131 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 PPP1R16BQ96T49 567 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 CDCA3Q99618 268 aaPredicted RBP17.88■□□□□ 0.45
NME3-201ENST00000219302 PHF7Q9BWX1 381 aaPredicted RBP17.88■□□□□ 0.45
NME3-201ENST00000219302 ATP6V0A4Q9HBG4 840 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 RNF19AQ9NV58 838 aa17.88■□□□□ 0.45
NME3-201ENST00000219302 EDIL3O43854 480 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 ATF7P17544 494 aaPredicted RBP17.87■□□□□ 0.45
NME3-201ENST00000219302 ZXDAP98168 799 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 PLCB3Q01970 1234 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 KRT32Q14532 448 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 MCTP2Q6DN12 878 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 CKAP2LQ8IYA6 745 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
NME3-201ENST00000219302 THNSL1Q8IYQ7 743 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 METTL13Q8N6R0 699 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 CASD1Q96PB1 797 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 S1PR5Q9H228 398 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 ADAMTS10Q9H324 1103 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 LZTS1Q9Y250 596 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 PCDHA10Q9Y5I2 948 aa17.87■□□□□ 0.45
NME3-201ENST00000219302 TMEM221A6NGB7 291 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 M0R296 226 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 MAGEB2O15479 319 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 PSAPP07602 524 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 HMGB1P09429 215 aaKnown RBP17.86■□□□□ 0.45
NME3-201ENST00000219302 LAG3P18627 525 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 SETQ01105 290 aaPredicted RBP17.86■□□□□ 0.45
NME3-201ENST00000219302 TRMT1LQ7Z2T5 733 aaKnown RBP17.86■□□□□ 0.45
NME3-201ENST00000219302 RASGRP4Q8TDF6 673 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
NME3-201ENST00000219302 KCNB2Q92953 911 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 LENG9Q96B70 501 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 TMEM117Q9H0C3 514 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 C6orf50Q9HD87 102 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 GABBR1Q9UBS5 961 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 MYH9P35579 1960 aaKnown RBP17.86■□□□□ 0.45
NME3-201ENST00000219302 ZDBF2Q9HCK1 2354 aa17.86■□□□□ 0.45
NME3-201ENST00000219302 CCDC196A0A1B0GTZ2 297 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 PRPF3O43395 683 aaKnown RBP17.85■□□□□ 0.45
NME3-201ENST00000219302 ZNF862O60290 1169 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 CPA1P15085 419 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 METAP2P50579 478 aaKnown RBP eCLIP17.85■□□□□ 0.45
NME3-201ENST00000219302 CLCN3P51790 818 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 NLRP11P59045 1033 aaKnown RBP17.85■□□□□ 0.45
NME3-201ENST00000219302 APOBRQ0VD83 1088 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 PRR16Q569H4 304 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 IER5LQ5T953 404 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 EFCAB12Q6NXP0 572 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 REXO1Q8N1G1 1221 aaKnown RBP17.85■□□□□ 0.45
NME3-201ENST00000219302 PBXIP1Q96AQ6 731 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 RPGRIP1Q96KN7 1286 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 CEP131Q9UPN4 1083 aa17.85■□□□□ 0.45
NME3-201ENST00000219302 EIF4BP23588 611 aaKnown RBP17.84■□□□□ 0.45
NME3-201ENST00000219302 SYCE2Q6PIF2 218 aa17.84■□□□□ 0.45
NME3-201ENST00000219302 KCNT2Q6UVM3 1135 aa17.84■□□□□ 0.45
NME3-201ENST00000219302 ZNF710Q8N1W2 664 aa17.84■□□□□ 0.45
NME3-201ENST00000219302 PUF60Q9UHX1 559 aaKnown RBP17.84■□□□□ 0.45
NME3-201ENST00000219302 HIDE1A8MVS5 230 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 GNA11P29992 359 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 NTRK3Q16288 839 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 ANKRD54Q6NXT1 300 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 Q6ZUG5 572 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 ECHDC2Q86YB7 292 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 FBXL16Q8N461 479 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 LRRC71Q8N4P6 559 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 PRSS33Q8NF86 280 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 CCDC12Q8WUD4 166 aaPredicted RBP17.83■□□□□ 0.44
NME3-201ENST00000219302 FAM167AQ96KS9 214 aa17.83■□□□□ 0.44
NME3-201ENST00000219302 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.44
NME3-201ENST00000219302 NID2Q14112 1375 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms