RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 SMARCA1P28370 1054 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 EAPPQ56P03 285 aaPredicted RBP16.26■□□□□ 0.19
SRRD-201ENST00000215917 TMEM179Q6ZVK1 233 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 SPOPO43791 374 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 PDHA1P08559 390 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 CALCOCO2Q13137 446 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 SPDL1Q96EA4 605 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 INTUQ9ULD6 942 aa16.26■□□□□ 0.19
SRRD-201ENST00000215917 CHUKO15111 745 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 TMEM132AQ24JP5 1023 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 TBCAO75347 108 aaKnown RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 CARSP49589 748 aaKnown RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
SRRD-201ENST00000215917 MAGOHP61326 146 aaKnown RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 PSMC6P62333 389 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 IFI16Q16666 785 aaKnown RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 RSBN1LQ6PCB5 846 aaPredicted RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 FAM47EQ6ZV65 393 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 FBXO11Q86XK2 927 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 PIGOQ8TEQ8 1089 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 MAGOHBQ96A72 148 aaKnown RBP16.25■□□□□ 0.19
SRRD-201ENST00000215917 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 USH1CQ9Y6N9 552 aa16.25■□□□□ 0.19
SRRD-201ENST00000215917 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 ARHGAP4P98171 946 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 ZRSR2Q15696 482 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 SPATA4Q8NEY3 305 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 KLHL29Q96CT2 875 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 BCAS3Q9H6U6 928 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 KLC4Q9NSK0 619 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 INTS9Q9NV88 658 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 CTTNBP2NLQ9P2B4 639 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 BAG6P46379 1132 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 ADAM9Q13443 819 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 DENND2CQ68D51 928 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 RGL1Q9NZL6 768 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 CLIC2O15247 247 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 POLE2P56282 527 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 FMNL3Q8IVF7 1028 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 ARHGAP20Q9P2F6 1191 aa16.24■□□□□ 0.19
SRRD-201ENST00000215917 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 MTRF1LQ9UGC7 380 aaKnown RBP16.24■□□□□ 0.19
SRRD-201ENST00000215917 MED24O75448 989 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 BMP3P12645 472 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 TRIP13Q15645 432 aaPredicted RBP16.23■□□□□ 0.19
SRRD-201ENST00000215917 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 FKBP3Q00688 224 aaKnown RBP16.23■□□□□ 0.19
SRRD-201ENST00000215917 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 TPH2Q8IWU9 490 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 TRIM6Q9C030 488 aaPredicted RBP16.23■□□□□ 0.19
SRRD-201ENST00000215917 PVALEFA0A1B0GWK0 134 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 SMIM24O75264 130 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 PALMO75781 387 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 SETDB1Q15047 1291 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 KIAA1755Q5JYT7 1200 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 ZNF449Q6P9G9 518 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
SRRD-201ENST00000215917 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 NKIRAS1Q9NYS0 192 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 HDAC9Q9UKV0 1011 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 TTC16Q8NEE8 873 aa16.23■□□□□ 0.19
SRRD-201ENST00000215917 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
SRRD-201ENST00000215917 ZNF263O14978 683 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 NR2F2P24468 414 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 CTTNQ14247 550 aaKnown RBP16.22■□□□□ 0.19
SRRD-201ENST00000215917 PDIA5Q14554 519 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 SYDE2Q5VT97 1194 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 NIM1KQ8IY84 436 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 CCT8L2Q96SF2 557 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 LRRC27Q9C0I9 530 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 RSPH10B2B2RC85 870 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 RSPH10BP0C881 870 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 NLRP14Q86W24 1093 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
SRRD-201ENST00000215917 CCDC197Q8NCU1 140 aa16.22■□□□□ 0.19
SRRD-201ENST00000215917 DCAF4Q8WV16 495 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms