RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 TLK2Q86UE8 772 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 MYOCDQ8IZQ8 938 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 MCPH1Q8NEM0 835 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 FGFBP2Q9BYJ0 223 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
SNRPD3-201ENST00000215829 CCNE1P24864 410 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 C16orf70Q9BSU1 422 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 HSD3B7Q9H2F3 369 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 MRPL44Q9H9J2 332 aaKnown RBP17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 ATP6V0A4Q9HBG4 840 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 FANCLQ9NW38 375 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 LARSQ9P2J5 1176 aaKnown RBP17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 NFE2L3Q9Y4A8 694 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 MYH11P35749 1972 aa17.64■□□□□ 0.41
SNRPD3-201ENST00000215829 KIF20AO95235 890 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 PLS3P13797 630 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 RFC5P40937 340 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 ODR4Q5SWX8 454 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 FAM102BQ5T8I3 360 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 CENPPQ6IPU0 288 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 EPM2AIP1Q7L775 607 aaPredicted RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 SCFD1Q8WVM8 642 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 P2RX5Q93086 422 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 FIZ1Q96SL8 496 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 BEGAINQ9BUH8 593 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 DHX33Q9H6R0 707 aaKnown RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 ADCY3O60266 1144 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 HBP1O60381 514 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 CASP5P51878 434 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 POLGP54098 1239 aaPredicted RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 CACNB2Q08289 660 aaPredicted RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 TRIM32Q13049 653 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF720Q7Z2F6 126 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 FAM178BQ8IXR5 827 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 LENG1Q96BZ8 264 aaPredicted RBP17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 RNPEPQ9H4A4 650 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 GPRC5CQ9NQ84 441 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 XPNPEP1Q9NQW7 623 aa17.63■□□□□ 0.41
SNRPD3-201ENST00000215829 H3BRB1 525 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 MAPTP10636 758 aaKnown RBP17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 ELNP15502 786 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 PMS1P54277 932 aaKnown RBP17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 EMC2Q15006 297 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 TTI2Q6NXR4 508 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 PXYLP1Q8TE99 480 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 SEMA6BQ9H3T3 888 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 C17orf75Q9HAS0 396 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 TRPC6Q9Y210 931 aa17.62■□□□□ 0.41
SNRPD3-201ENST00000215829 TRIM49BA6NDI0 452 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 ZBTB42B2RXF5 422 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 SEPT4O43236 478 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 AP5Z1O43299 807 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 GCNT3O95395 438 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF286BP0CG31 522 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 MYBP10242 640 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 NMT1P30419 496 aaKnown RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 DEKP35659 375 aaKnown RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 CPT1AP50416 773 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 PRMT2P55345 433 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 RTP1P59025 263 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 BMT2Q1RMZ1 405 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 BRDTQ58F21 947 aaPredicted RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 ANKRD40Q6AI12 368 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 EXOC8Q8IYI6 725 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 EIF3DO15371 548 aaKnown RBP eCLIP17.61■□□□□ 0.415e-6■□□□□ 8.5
SNRPD3-201ENST00000215829 MAFO75444 373 aaPredicted RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 HMGCRP04035 888 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF18P17022 549 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 CNGA1P29973 690 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 TPD52L1Q16890 204 aaPredicted RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 FOXR2Q6PJQ5 311 aa17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 SAMSN1Q9NSI8 373 aaKnown RBP17.61■□□□□ 0.41
SNRPD3-201ENST00000215829 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 SOX10P56693 466 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 TBC1D8BQ0IIM8 1120 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 ZNF484Q5JVG2 852 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 SARM1Q6SZW1 724 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 STXBP4Q6ZWJ1 553 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 SLC17A8Q8NDX2 589 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 NTPCRQ9BSD7 190 aaKnown RBP17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 STRA6Q9BX79 667 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 KCTD10Q9H3F6 313 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
SNRPD3-201ENST00000215829 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms