RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 K7ENM7 598 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
VCL-201ENST00000211998 FAM160B1Q5W0V3 765 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 OLFML3Q9NRN5 406 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 ABCC12Q96J65 1359 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 TMCC1O94876 653 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 PDE8BO95263 885 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 ACADSP16219 412 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 HIC1Q14526 733 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 GPATCH4Q5T3I0 446 aaKnown RBP11.17□□□□□ -0.62
VCL-201ENST00000211998 TEDDM1Q5T9Z0 273 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 PCDHB6Q9Y5E3 794 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 KRT4P19013 534 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 NR5A1Q13285 461 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 RINT1Q6NUQ1 792 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 CATSPER1Q8NEC5 780 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 POMGNT1Q8WZA1 660 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 L2HGDHQ9H9P8 463 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
VCL-201ENST00000211998 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
VCL-201ENST00000211998 H3BQF6 201 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 HSPA4LO95757 839 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 MMP1P03956 469 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 ASPRV1Q53RT3 343 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 FRMPD2Q68DX3 1309 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 PCGF5Q86SE9 256 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 FAM178BQ8IXR5 827 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.626e-7■■■□□ 15.4
VCL-201ENST00000211998 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 KRT1P04264 644 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 MARK3P27448 753 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 CDC25AP30304 524 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SCTRP47872 440 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 RAP1GDS1P52306 607 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 DDX17Q92841 729 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 EFCAB6Q5THR3 1501 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SEC24DO94855 1032 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 AGTP01019 485 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 MYBL1P10243 752 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 MFAP3P55082 362 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SIK1P57059 783 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 DYNLT1P63172 113 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 FLOT2Q14254 428 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 METTL13Q8N6R0 699 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 ERP27Q96DN0 273 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 CLMNQ96JQ2 1002 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 SNX12Q9UMY4 172 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 KCNQ3O43525 872 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 CCDC22O60826 627 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 MYL1P05976 194 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 COPS2P61201 443 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 KIAA0825Q8IV33 1275 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 LRRC47Q8N1G4 583 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 NOA1Q8NC60 698 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 DCPSQ96C86 337 aaKnown RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 ZNF277Q9NRM2 450 aaPredicted RBP11.16□□□□□ -0.62
VCL-201ENST00000211998 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
VCL-201ENST00000211998 TTC26A0AVF1 554 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 LRRC53A6NM62 1247 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 NECTIN1Q15223 517 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 PNKPQ96T60 521 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 GDAQ9Y2T3 454 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 ZNF189O75820 626 aaPredicted RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 ZCWPW2Q504Y3 356 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 AGBL2Q5U5Z8 902 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 PDIK1LQ8N165 341 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 CCDC127Q96BQ5 260 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 HESX1Q9UBX0 185 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 KRT37O76014 449 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 FAM200BP0CF97 657 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 NQO1P15559 274 aaKnown RBP11.15□□□□□ -0.62
VCL-201ENST00000211998 PTK2Q05397 1052 aa11.15□□□□□ -0.62
VCL-201ENST00000211998 KDSRQ06136 332 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms