RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 SSU72P8A0A1W2PR75 194 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 TMCO5BA8MYB1 307 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 PIK3CDO00329 1044 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 VIL1P09327 827 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 CORO7P57737 925 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 FAM153CQ494X1 144 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 ODR4Q5SWX8 454 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 POLR3CQ9BUI4 534 aaPredicted RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 WDR11Q9BZH6 1224 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 GCNT4Q9P109 453 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 COL20A1Q9P218 1284 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 FZD1Q9UP38 647 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 HYOU1Q9Y4L1 999 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 TISP43B9A030 160 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 IPO5O00410 1097 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 PDXKO00764 312 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 CYP3A4P08684 503 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 EPB41P11171 864 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 ALAS1P13196 640 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 CAP2P40123 477 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 SLC18A3Q16572 532 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 GMLQ99445 158 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 EFCC1Q9HA90 598 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
CTNS-201ENST00000046640 TYW1Q9NV66 732 aaKnown RBP14.35□□□□□ -0.11
CTNS-201ENST00000046640 ITGB5P18084 799 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 PRELPP51888 382 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 MARSP56192 900 aaKnown RBP14.34□□□□□ -0.11
CTNS-201ENST00000046640 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 FAM178BQ8IXR5 827 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 SLC35C1Q96A29 364 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 LXNQ9BS40 222 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 RAVER2Q9HCJ3 691 aaKnown RBP14.34□□□□□ -0.11
CTNS-201ENST00000046640 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
CTNS-201ENST00000046640 WNT10BO00744 389 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 HSF2BPO75031 334 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 GLI1P08151 1106 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 CXCL9Q07325 125 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 TTMPQ5BVD1 217 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 FRMD5Q7Z6J6 570 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 HOOK2Q96ED9 719 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 CCDC43Q96MW1 224 aaKnown RBP14.34□□□□□ -0.11
CTNS-201ENST00000046640 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 RANBP17Q9H2T7 1088 aaKnown RBP14.34□□□□□ -0.11
CTNS-201ENST00000046640 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 PARVGQ9HBI0 331 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 STIM2Q9P246 746 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 COL4A5P29400 1685 aa14.34□□□□□ -0.11
CTNS-201ENST00000046640 GFPT2O94808 682 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 MCTP2Q6DN12 878 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.11
CTNS-201ENST00000046640 IRF2BP2Q7Z5L9 587 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 KLHL7Q8IXQ5 586 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 MMGT1Q8N4V1 131 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 KRT12Q99456 494 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 EDEM3Q9BZQ6 932 aa14.33□□□□□ -0.11
CTNS-201ENST00000046640 RPL13P26373 211 aaKnown RBP14.33□□□□□ -0.12
CTNS-201ENST00000046640 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
CTNS-201ENST00000046640 FAM186BQ8IYM0 893 aa14.33□□□□□ -0.12
CTNS-201ENST00000046640 SLC5A5Q92911 643 aa14.33□□□□□ -0.12
CTNS-201ENST00000046640 ZIM3Q96PE6 472 aa14.33□□□□□ -0.12
CTNS-201ENST00000046640 ASTN2O75129 1339 aaPredicted RBP14.33□□□□□ -0.12
CTNS-201ENST00000046640 EBAG9O00559 213 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 PJA2O43164 708 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 LRRN2O75325 713 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 EIF2AK2P19525 551 aaKnown RBP14.32□□□□□ -0.12
CTNS-201ENST00000046640 RASA3Q14644 834 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 EPHA7Q15375 998 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 PRAMEF18Q5VWM3 479 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 RTKN2Q8IZC4 609 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 SYCP3Q8IZU3 236 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 AIPL1Q9NZN9 384 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 SORBS3O60504 671 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 HEXIM1O94992 359 aaKnown RBP14.32□□□□□ -0.12
CTNS-201ENST00000046640 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
CTNS-201ENST00000046640 KCNA3P22001 575 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 PPFIA1Q13136 1202 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 NAB2Q15742 525 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 DPY19L2P1Q6NXN4 242 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 GBP6Q6ZN66 633 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 NUCKS1Q9H1E3 243 aaKnown RBP14.32□□□□□ -0.12
CTNS-201ENST00000046640 KCNH7Q9NS40 1196 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 FAM169AQ9Y6X4 670 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 ZMYM2Q9UBW7 1377 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 ARHGEF35A5YM69 484 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 HIP1RO75146 1068 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 TCP1P17987 556 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms