RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PNMA2Q9UL42 364 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 KIF3CO14782 793 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CALUO43852 315 aaPredicted RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GCNT3O95395 438 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SLURP2P0DP57 97 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GCFC2P16383 781 aaKnown RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SLC12A3P55017 1021 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GRAPQ13588 217 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 PRR16Q569H4 304 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 ANKRD20A8PQ5CZ79 823 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 HYIQ5T013 277 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GLYCTKQ8IVS8 523 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SYCE1Q8N0S2 351 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 UHMK1Q8TAS1 419 aaKnown RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 REEP2Q9BRK0 252 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SLITRK6Q9H5Y7 841 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 FAM114A2Q9NRY5 505 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 FRMD3A2A2Y4 597 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SRRM3A6NNA2 597 aaPredicted RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 BUB1BO60566 1050 aaPredicted RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CAND2O75155 1236 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 TRIM37O94972 964 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 TTLL1O95922 423 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 NF2P35240 595 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 RBM5P52756 815 aaKnown RBP eCLIP11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GPSM2P81274 684 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 KCNA1Q09470 495 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 DRP2Q13474 957 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GIT2Q14161 759 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 EPHA7Q15375 998 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 DPY19L2P1Q6NXN4 242 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 IKZF4Q9H2S9 585 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 VEZTQ9HBM0 779 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 MAST2Q6P0Q8 1798 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SPDYE3A6NKU9 549 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 ZBTB5O15062 677 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 NR3C1P04150 777 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 ELF1P32519 619 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 PDE6BP35913 854 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 E2F5Q15329 346 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 SNCBQ16143 134 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 CYB5D1Q6P9G0 228 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 GLG1Q92896 1179 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 DNM3Q9UQ16 869 aa11.42□□□□□ -0.58
CX3CL1-201ENST00000006053 UTRNP46939 3433 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 EVI5O60447 810 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 SHBGP04278 402 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 ZBTB48P10074 688 aaPredicted RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 HOXD13P35453 343 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 PRKCIP41743 596 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 SCTRP47872 440 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 PLTPP55058 493 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 FUKQ8N0W3 1084 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 SLC35G2Q8TBE7 412 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 ANO3Q9BYT9 981 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 CCNL1Q9UK58 526 aaPredicted RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 STXBP5LQ9Y2K9 1186 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 SNX24Q9Y343 169 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 OPLAHO14841 1288 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 KRT13P13646 458 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 STAT1P42224 750 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 BYSLQ13895 437 aaKnown RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 ZC3H3Q8IXZ2 948 aaKnown RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 RASGEF1CQ8N431 466 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 TBC1D22AQ8WUA7 517 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 TATDN2Q93075 761 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 HVCN1Q96D96 273 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 SIX2Q9NPC8 291 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 TRAF3IP3Q9Y228 551 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 PCDHA1Q9Y5I3 950 aa11.41□□□□□ -0.58
CX3CL1-201ENST00000006053 KLHL33A6NCF5 533 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 SNHG28P0DPA3 235 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 SNAP25P60880 206 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 DR1Q01658 176 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 SLFN11Q7Z7L1 901 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 SEPT12Q8IYM1 358 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 SLC35C1Q96A29 364 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 FAXDC2Q96IV6 333 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 XPO6Q96QU8 1125 aaKnown RBP11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 DAAM1Q9Y4D1 1078 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 PITPNM2Q9BZ72 1349 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 TBCAO75347 108 aaKnown RBP11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 RPS6KA4O75676 772 aa11.4□□□□□ -0.58
CX3CL1-201ENST00000006053 FERP16591 822 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms