RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Rnf207Q3V3A7 635 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Carmil2Q3V3V9 1296 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mum1l1Q4VA55 681 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Znf496Q5SXI5 585 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sorbs1Q62417 1290 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sh3gl3Q62421 347 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mcf2lQ64096 1149 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Esco1Q69Z69 843 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Swap70Q6A028 585 aaKnown RBP11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Xlr3bQ6P205 226 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ece2Q80Z60 881 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Fbxl21Q8BFZ4 434 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ublcp1Q8BGR9 318 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Haus1Q8BHX1 278 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Frmd6Q8C0V9 622 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Usp20Q8C6M1 916 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sgms1Q8VCQ6 419 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ccdc65Q8VHI7 493 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Calml4Q91WQ9 153 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mettl13Q91YR5 698 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ube2sQ921J4 223 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Haus2Q9CQS9 234 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Cfap57Q9D180 1249 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ddx20Q9JJY4 825 aaKnown RBP11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Irs4Q9Z0Y7 1216 aa11.15□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Cep85lA0A1W2P884 806 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Arid4aF8VPQ2 1261 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Dctn1O08788 1281 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Dpysl4O35098 572 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nmt2O70311 529 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Kcna1P16388 495 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Klra9Q2TJJ8 266 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Crtc2Q3U182 692 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Armc2Q3URY6 854 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Znf652Q5DU09 608 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 GartQ64737 1010 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Inpp4bQ6P1Y8 924 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rbm15bQ6PHZ5 887 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tekt3Q6X6Z7 490 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Gjd4Q8BSD4 364 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Champ1Q8K327 802 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nup133Q8R0G9 1155 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Bud13Q8R149 637 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 1700020D05RikQ99PB1 294 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 SarnpQ9D1J3 210 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Erp44Q9D1Q6 406 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Mad2l2Q9D752 211 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Usp14Q9JMA1 493 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Klra10Q9R1G6 266 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nfs1Q9Z1J3 459 aa11.14□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ankrd63A2ARS0 390 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Hsf3D0VYS2 492 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Tmem132bF7BAB2 1078 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Apol10bG3X9K7 334 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Prl2c2P04095 224 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ercc5P35689 1170 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ighmbp2P40694 993 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Mmp14P53690 582 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Myo1fP70248 1099 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Atp9bP98195 1146 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nlrx1Q3TL44 975 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fam198aQ3UY90 562 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ttf2Q5NC05 1138 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Fxr1Q61584 677 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sin3bQ62141 1098 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccpg1Q640L3 753 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 GmipQ6PGG2 971 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Sept9Q80UG5 583 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Dlg1Q811D0 905 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ubp1Q811S7 540 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Cc2d1bQ8BRN9 848 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Pdcd2lQ8C5N5 364 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc15Q8C9M2 810 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc28aQ8CEI3 192 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Washc1Q8VDD8 475 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Asic2Q925H0 512 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ddah1Q9CWS0 285 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 TbcbQ9D1E6 244 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Mphosph6Q9D1Q1 161 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rasgef1cQ9D300 466 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc89Q9DA73 370 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Txnrd1Q9JMH6 613 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Myh8P13542 1937 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Proca1B0QZF7 307 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 ErmardE9Q048 622 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Eftud2O08810 971 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ppef2O35385 757 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Krt8P11679 490 aaKnown RBP11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rhbdl3P58873 404 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Abi2P62484 446 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Nme2Q01768 152 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rtkn2Q14B46 604 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 SkiQ60698 725 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Klra3Q64329 266 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Lrrcc1Q69ZB0 1026 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Anks6Q6GQX6 883 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Ccdc189Q6NZQ0 333 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Slf2Q6P9P0 1278 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 Rhbdf1Q6PIX5 856 aa11.13□□□□□ -0.63
Pdlim5-204ENSMUST00000168967 LnpkQ7TQ95 425 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms