RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Adam1aQ60813 791 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Prpf38aQ4FK66 312 aaKnown RBP14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 PigoQ9JJI6 1093 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Znf335A2A5K6 1337 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Trim43aQ3TL54 445 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zbtb17Q60821 794 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ptk6Q64434 451 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cog5Q8C0L8 829 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Veph1A1A535 833 aa14.83□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Lrch2Q3UMG5 773 aa14.83□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rbbp7Q60973 425 aaKnown RBP14.83□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ctdspl2Q8BG15 465 aa14.83□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Nol3Q9D1X0 220 aa14.83□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Asap3Q5U464 904 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Arl13bQ640N2 427 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 BegainQ68EF6 600 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Olfr866Q8VFI7 312 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ttll1Q91V51 423 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Serpinb3bQ9D1Q5 387 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Chek2Q9Z265 546 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Heatr9Q5QNV8 569 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Uba6Q8C7R4 1053 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Rpap2Q8VC34 614 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Serpina1bP22599 413 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Znf219Q6IQX8 726 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Baiap3Q80TT2 1134 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 RpainQ9CWY9 219 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Trim54Q9ERP3 366 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 P4hbP09103 509 aaKnown RBP14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Casp4P70343 373 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Sin3bQ62141 1098 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Abi1Q8CBW3 481 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ston1Q8CDJ8 730 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Trim13Q9CYB0 407 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ddx21Q9JIK5 851 aaKnown RBP14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Atp11cQ9QZW0 1129 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Akt3Q9WUA6 479 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Prpf18Q8BM39 342 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Galnt5Q8C102 930 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ing3Q8VEK6 421 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Cdk9Q99J95 372 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Krt17Q9QWL7 433 aa14.83□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm21149A0A0G2JFY7 255 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Speer4cG3UXD1 256 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm17019K7N6W5 255 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm9758Q80ZT2 255 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Lrrc8dQ8BGR2 859 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Tasp1Q8R1G1 420 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Cox16Q9CR63 106 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Itpripl1A2ASA8 547 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm5861F6VCN9 180 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 4933402N22RikF7D1B3 190 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Psmc3O88685 442 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 PtprcP06800 1291 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Anxa1P10107 346 aaKnown RBP14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 RimklbQ80WS1 387 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Wdr60Q8C761 999 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gmeb1Q9JL60 562 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Card9A2AIV8 536 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Tgif2lx2Q8K5B9 231 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 PlvapQ91VC4 438 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Vps33aQ9D2N9 598 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Glt1d1A4FUP9 346 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 S100gP97816 79 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 1700013D24RikQ0P521 120 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gsdmc4Q3TR54 480 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Tmem247Q497K7 211 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Afap1l2Q5DTU0 825 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 GartQ64737 1010 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Vps37aQ8CHS8 397 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ciao1Q99KN2 339 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Pramef12Q9D2F1 463 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Frmpd4A2AFR3 1320 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm16486A0A1D5RMD1 1434 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Rabgap1lA6H6A9 815 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Mysm1Q69Z66 819 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 PodnQ7TQ62 611 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Sptlc3Q8BG54 563 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gtf2ird1Q9JI57 1104 aaKnown RBP14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm28897A0A087WP44 222 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Akr1b1P45376 316 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Axdnd1Q3UZ57 424 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 SpdyaQ5IBH7 310 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Myo1dQ5SYD0 1006 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Miga2Q8BK03 593 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Usp44Q8C2S0 711 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 StrnO55106 780 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Ptk2P34152 1090 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Meis1Q60954 390 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Rbbp8Q80YR6 893 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 HibadhQ99L13 335 aaKnown RBP14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 OoepQ9CWE6 164 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Llcfc1Q9D9P8 108 aa14.82□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Nup160Q9Z0W3 1402 aaKnown RBP14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gm21497A0A087WRK3 222 aa14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Exosc10P56960 887 aaKnown RBP14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 4921524L21RikQ9D5T2 438 aa14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Lmtk2Q3TYD6 1471 aa14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Klc1O88447 541 aa14.81□□□□□ -0.04
Col5a1-201ENSMUST00000028280 Gtpbp6Q3U6U5 514 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms