RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Msh3P13705 1091 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Mcm3P25206 812 aaKnown RBP12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ppm1aP49443 382 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ephb3P54754 993 aaKnown RBP12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 RenbpP82343 430 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Pex1Q5BL07 1284 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Islr2Q5RKR3 745 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ahcyl2Q68FL4 613 aaKnown RBP12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 RragbQ6NTA4 374 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Clec16aQ80U30 1036 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Cwf19l2Q8BG79 887 aaKnown RBP12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Cdca8Q8BHX3 289 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 EtnpplQ8BWU8 499 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Clec1aQ8BWY2 269 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ddx19bQ8BZY3 494 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Pnma1Q8C1C8 353 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ccdc113Q8C5T8 377 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 E2f4Q8R0K9 410 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Plcb4Q91UZ1 1175 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Plcb1Q9Z1B3 1216 aa12.11□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Col4a3Q9QZS0 1669 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Smim10l2aA0A0B4J1F8 78 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Dcpp3L7N259 170 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Sptlc1O35704 473 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 PrkceP16054 737 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Kcnma1Q08460 1209 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Mier3Q3UHF3 551 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Mindy1Q76LS9 468 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Hook2Q7TMK6 716 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Arrdc3Q7TPQ9 414 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ctdspl2Q8BG15 465 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Thap3Q8BJ25 218 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ppme1Q8BVQ5 386 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Wdr24Q8CFJ9 790 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Fam20aQ8CID3 541 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 GhdcQ99J23 532 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 YwhabQ9CQV8 246 aaKnown RBP12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Josd2Q9CR30 188 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Eya4Q9Z191 616 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Sucla2Q9Z2I9 463 aa12.1□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Col5a3Q9JLI2 1739 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Plcb2A3KGF7 1181 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Gm12800B1AUV4 484 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Gm4788E9Q8B5 879 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Gm10134F6ZQC6 126 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 2610008E11RikG3X964 669 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Gm12794L7MTS5 483 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Kpna6O35345 536 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 PargO88622 969 aaKnown RBP12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Bcat1P24288 386 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Cyp2f2P33267 491 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 DmpkP54265 631 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Mgat3Q10470 538 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Rufy4Q3TYX8 563 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Cpa4Q6P8K8 420 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 NostrinQ6WKZ7 506 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Plppr4Q7TME0 766 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Ush1gQ80T11 461 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Rint1Q8BZ36 792 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Rec8Q8C5S7 591 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Zfp202Q8C879 641 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Naa30Q8CES0 364 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Znf445Q8R2V3 986 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Q91WD4 421 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Prmt7Q922X9 692 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Dqx1Q924H9 718 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 NptxrQ99J85 493 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Snw1Q9CSN1 536 aaKnown RBP12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Polr2dQ9D7M8 142 aaKnown RBP12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Wfdc1Q9ESH5 211 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Nudt5Q9JKX6 218 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Oaz3Q9R109 243 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Wdr46Q9Z0H1 622 aaKnown RBP12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Mtmr1Q9Z2C4 669 aa12.09□□□□□ -0.47
Tubb1-201ENSMUST00000016399 Krt36B1AQ75 473 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Cfap58B2RW38 873 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Acad12D3Z7X0 555 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Gm16427J3QN52 483 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Clk2O35491 499 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 SsbP32067 415 aaKnown RBP12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Nhlh1Q02576 133 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Syce2Q505B8 171 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Trpc6Q61143 930 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 FcgrtQ61559 365 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Ipo5Q8BKC5 1097 aaKnown RBP12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Tcf25Q8R3L2 676 aaKnown RBP12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Oit3Q8R4V5 546 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Tmco4Q91WU4 631 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 PccaQ91ZA3 724 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Akirin1Q99LF1 191 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Glipr1l2Q9CQ35 332 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Arhgap8Q9CXP4 425 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Krtap5-3Q9D226 196 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Pold3Q9EQ28 462 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Slc5a4aQ9ET37 656 aa12.08□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Akap17bA2A3V1 959 aa12.07□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Arhgap6O54834 987 aa12.07□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Cd70O55237 195 aa12.07□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Cdc6O89033 562 aaKnown RBP12.07□□□□□ -0.48
Tubb1-201ENSMUST00000016399 Mtco1P00397 514 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms