RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MARCH6O60337 910 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 C22orf31O95567 290 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 AMHP03971 560 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 OATP04181 439 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 CA3P07451 260 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 FOSL2P15408 326 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 GUCY1B3Q02153 619 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 TMEM62Q0P6H9 643 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 PPP2R5CQ13362 524 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 UGCGQ16739 394 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
PHGDH-231ENST00000641939 TSHZ1Q6ZSZ6 1077 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-231ENST00000641939 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 HAS1Q92839 578 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 TRPV2Q9Y5S1 764 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 SQORQ9Y6N5 450 aa16.93■□□□□ 0.3
PHGDH-231ENST00000641939 TTC3P53804 2025 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 GJB5O95377 273 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
PHGDH-231ENST00000641939 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
PHGDH-231ENST00000641939 PRDM12Q9H4Q4 367 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 TRANK1O15050 2925 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
PHGDH-231ENST00000641939 MAGEB2O15479 319 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 MYOCDQ8IZQ8 938 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 USP38Q8NB14 1042 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 RAD9AQ99638 391 aa16.91■□□□□ 0.3
PHGDH-231ENST00000641939 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-231ENST00000641939 EML1O00423 815 aa16.9■□□□□ 0.3
PHGDH-231ENST00000641939 CD52P31358 61 aa16.9■□□□□ 0.3
PHGDH-231ENST00000641939 PSMC5P62195 406 aa16.9■□□□□ 0.3
PHGDH-231ENST00000641939 XKR3Q5GH77 459 aa16.9■□□□□ 0.3
PHGDH-231ENST00000641939 BANK1Q8NDB2 785 aa16.9■□□□□ 0.3
PHGDH-231ENST00000641939 GAS2L1Q99501 681 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-231ENST00000641939 FOXP1Q9H334 677 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-231ENST00000641939 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
PHGDH-231ENST00000641939 PRUNE2Q8WUY3 3088 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 NEMFO60524 1076 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
PHGDH-231ENST00000641939 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
PHGDH-231ENST00000641939 TMOD1P28289 359 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 MCM2P49736 904 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 TAP1Q03518 808 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 CALCRLQ16602 461 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 EFCAB12Q6NXP0 572 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 TOP1MTQ969P6 601 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 TMX3Q96JJ7 454 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 NIFKQ9BYG3 293 aaKnown RBP16.89■□□□□ 0.29
PHGDH-231ENST00000641939 SEPT9Q9UHD8 586 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-231ENST00000641939 GINS2Q9Y248 185 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 INSL6Q9Y581 213 aa16.89■□□□□ 0.29
PHGDH-231ENST00000641939 UNC80Q8N2C7 3258 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 WNT7AO00755 349 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 ARHGEF15O94989 841 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 STBD1O95210 358 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 CLCN3P51790 818 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 SPIRE1Q08AE8 756 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 PAK2Q13177 524 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 GNL2Q13823 731 aaKnown RBP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 EPHA7Q15375 998 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 TARBP2Q15633 366 aaKnown RBP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 LINC01465Q8N7H1 131 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-231ENST00000641939 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 FTHL17Q9BXU8 183 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 PADI3Q9ULW8 664 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 NLRC5Q86WI3 1866 aa16.88■□□□□ 0.29
PHGDH-231ENST00000641939 ARID2Q68CP9 1835 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 ENPP3O14638 875 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 UPP2O95045 317 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 VTNP04004 478 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 ATP2B1P20020 1258 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-231ENST00000641939 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-231ENST00000641939 KIZQ2M2Z5 673 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 MTERF2Q49AM1 385 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 ZNF710Q8N1W2 664 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 SUGCTQ9HAC7 445 aa16.87■□□□□ 0.29
PHGDH-231ENST00000641939 CDHR5Q9HBB8 845 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms