RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 BANK1Q8NDB2 785 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 LPAR1Q92633 364 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 SLC35C1Q96A29 364 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 KIAA1683Q9H0B3 1180 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 TAOK3Q9H2K8 898 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 IKZF4Q9H2S9 585 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 KCND2Q9NZV8 630 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 SEL1LQ9UBV2 794 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 DOCK1Q14185 1865 aa18.73■□□□□ 0.59
PHGDH-211ENST00000641213 DDX39AO00148 427 aaKnown RBP18.72■□□□□ 0.59
PHGDH-211ENST00000641213 PRLRP16471 622 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 ZNF280AP59817 542 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-211ENST00000641213 KLHL30Q0D2K2 578 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 DGKZQ13574 1117 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 TERF2Q15554 542 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 ASIC2Q16515 512 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 SLC18A3Q16572 532 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 NFIL3Q16649 462 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 EXOC3L4Q17RC7 722 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 KLHDC7AQ5VTJ3 777 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 WDR93Q6P2C0 686 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 ZNF720Q7Z2F6 126 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 RNF10Q8N5U6 811 aaKnown RBP18.72■□□□□ 0.59
PHGDH-211ENST00000641213 IL31RAQ8NI17 732 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 BORCS6Q96GS4 357 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 DRC1Q96MC2 740 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 KCNH7Q9NS40 1196 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 COL11A1P12107 1806 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-211ENST00000641213 UCHL3P15374 230 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 GHRHRQ02643 423 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 TNFAIP1Q13829 316 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 TNIP1Q15025 636 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 DALRD3Q5D0E6 543 aaKnown RBP18.72■□□□□ 0.59
PHGDH-211ENST00000641213 TCERG1LQ5VWI1 586 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 CREG2Q8IUH2 290 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 CPXCR1Q8N123 301 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 L1RE1Q9UN81 338 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 PCDHB13Q9Y5F0 798 aa18.72■□□□□ 0.59
PHGDH-211ENST00000641213 UBE4BO95155 1302 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 A0A087X0T9 212 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 FAM228BP0C875 321 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 NIPA1Q7RTP0 329 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 KSR1Q8IVT5 923 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 NOX5Q96PH1 765 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 PKD2L1Q9P0L9 805 aa18.71■□□□□ 0.59
PHGDH-211ENST00000641213 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 ALAS1P13196 640 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 GUCY2CP25092 1073 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 COG2Q14746 738 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 GBP6Q6ZN66 633 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 MIER3Q7Z3K6 550 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 IRF2BP2Q7Z5L9 587 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 FAM178BQ8IXR5 827 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 NEK9Q8TD19 979 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 RAVER2Q9HCJ3 691 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 SIX2Q9NPC8 291 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 LUC7LQ9NQ29 371 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 ARHGEF35A5YM69 484 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 BUB1O43683 1085 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 CTNND1O60716 968 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 PSMC2P35998 433 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 MUM1L1Q5H9M0 696 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 HDXQ7Z353 690 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 FAM186BQ8IYM0 893 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 COG1Q8WTW3 980 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 OSBPL9Q96SU4 736 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-211ENST00000641213 ADAMTS1Q9UHI8 967 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 UBIAD1Q9Y5Z9 338 aa18.7■□□□□ 0.58
PHGDH-211ENST00000641213 MRPS9P82933 396 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 NAB2Q15742 525 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 PCNX4Q63HM2 1172 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 NFRKBQ6P4R8 1299 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 STXBP4Q6ZWJ1 553 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 SPAG5Q96R06 1193 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 SUGCTQ9HAC7 445 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 GINM1Q9NU53 330 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 FBXL5Q9UKA1 691 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 HYOU1Q9Y4L1 999 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 KIAA1217Q5T5P2 1943 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 TARSL2A2RTX5 802 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 GTPBP10A4D1E9 387 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 NFKBIEO00221 500 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 HIP1RO75146 1068 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 TCP1P17987 556 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 PTK2Q05397 1052 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 MAPK7Q13164 816 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 ITGB3BPQ13352 177 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms