RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SWAP70Q9UH65 585 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 PPP1R9AQ9ULJ8 1098 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 PCDHGC5Q9Y5F6 944 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 C5orf60A6NFR6 353 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 RPS8P62241 208 aaKnown RBP14.92□□□□□ -0.02
SCARB2-227ENST00000640957 GRB10Q13322 594 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 NBPF20Q3BBV1 942 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 PARP10Q53GL7 1025 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 FIGNQ5HY92 759 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 ATXN2LQ8WWM7 1075 aaKnown RBP14.92□□□□□ -0.02
SCARB2-227ENST00000640957 LARP4BQ92615 738 aaKnown RBP14.92□□□□□ -0.02
SCARB2-227ENST00000640957 MINPP1Q9UNW1 487 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 COL4A3BPQ9Y5P4 624 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
SCARB2-227ENST00000640957 SLC37A4O43826 429 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CALML3P27482 149 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 USP11P51784 963 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 PMS2P54278 862 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 MXRA7P84157 204 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CPNE8Q86YQ8 564 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 FITM2Q8N6M3 262 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 COA7Q96BR5 231 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 FAM84BQ96KN1 310 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CCSER1Q9C0I3 900 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 LUC7LQ9NQ29 371 aaKnown RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 METTL5Q9NRN9 209 aaKnown RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 SLC12A4Q9UP95 1085 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 E9PMD0 336 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CALRP27797 417 aaKnown RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 RCSD1Q6JBY9 416 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 C3orf20Q8ND61 904 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 SUGT1Q9Y2Z0 365 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CLIC2O15247 247 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 MSH2P43246 934 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 AMPD3Q01432 767 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 DR1Q01658 176 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 KCNH2Q12809 1159 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 RNF220Q5VTB9 566 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 CDCA2Q69YH5 1023 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-227ENST00000640957 MIGA2Q7L4E1 593 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 TSG101Q99816 390 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 MXD3Q9BW11 206 aa14.91□□□□□ -0.02
SCARB2-227ENST00000640957 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 ATP2A2P16615 1042 aaKnown RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 SLC8A3P57103 927 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 USP4Q13107 963 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 ADAM9Q13443 819 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 PICALMQ13492 652 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 HP1BP3Q5SSJ5 553 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 EMC10Q5UCC4 262 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CAPN12Q6ZSI9 719 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 GLYCTKQ8IVS8 523 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CCDC26Q8TAB7 109 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 C7orf25Q9BPX7 421 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 IL17RBQ9NRM6 502 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CEP72Q9P209 647 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 SSU72P8A0A1W2PR75 194 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CALM1P0DP23 149 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CALM2P0DP24 149 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 CALM3P0DP25 149 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 TARSP26639 723 aaKnown RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 TNNI2P48788 182 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 RAD23BP54727 409 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 AGBL2Q5U5Z8 902 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 MYOCDQ8IZQ8 938 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 MAB21L3Q8N8X9 362 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 TPCN2Q8NHX9 752 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 PNMA5Q96PV4 448 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 SH3GL3Q99963 347 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 RNF14Q9UBS8 474 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 NAGPAQ9UK23 515 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 INTUQ9ULD6 942 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 DAAM1Q9Y4D1 1078 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 MYBP10242 640 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 PRUNE1Q86TP1 453 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 RBM46Q8TBY0 533 aaKnown RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 ATP8B4Q8TF62 1192 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 FAM118BQ9BPY3 351 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
SCARB2-227ENST00000640957 FRMPD2Q68DX3 1309 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-227ENST00000640957 MEIS1O00470 390 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 RIMBP2O15034 1052 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 MYH1P12882 1939 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 ATP4AP20648 1035 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 CHD4Q14839 1912 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
SCARB2-227ENST00000640957 EPB41L4BQ9H329 900 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms