RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	SERPING1	P05155	500 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	NR3C2	P08235	984 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	KRT13	P13646	458 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	RFX1	P22670	979 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	YWHAB	P31946	246 aa	Known RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ERVK-24	P63145	666 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	CACNB1	Q02641	598 aa	Predicted RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	PPAT	Q06203	517 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	KCNH2	Q12809	1159 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	BAAT	Q14032	418 aa	Predicted RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	PLS1	Q14651	629 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	STXBP2	Q15833	593 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	MUM1L1	Q5H9M0	696 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ZNF569	Q5MCW4	686 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	CCDC122	Q5T0U0	273 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	TCERG1L	Q5VWI1	586 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	GBP6	Q6ZN66	633 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	USP50	Q70EL3	339 aa	Predicted RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	VSIG10L	Q86VR7	867 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ANKRD13A	Q8IZ07	590 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	BANK1	Q8NDB2	785 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	NLGN2	Q8NFZ4	835 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	TRIM58	Q8NG06	486 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.13	□□□□□ -0.95	3e-6	■■■■■ 38.3
PNKP-231	ENST00000640501	TRPM4	Q8TD43	1214 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	KIFAP3	Q92845	792 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	JAKMIP2	Q96AA8	810 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	RPGRIP1	Q96KN7	1286 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ACCS	Q96QU6	501 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	SPAG5	Q96R06	1193 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	TAAR1	Q96RJ0	339 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	UIMC1	Q96RL1	719 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	RUSC1	Q9BVN2	902 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	MOV10L1	Q9BXT6	1211 aa	Known RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	PLCB1	Q9NQ66	1216 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	RNF181	Q9P0P0	153 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	FBXL5	Q9UKA1	691 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	SIK3	Q9Y2K2	1263 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	COL11A1	P12107	1806 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	LOC285556	D6RIA3	1793 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ASTN2	O75129	1339 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	WDR90	Q96KV7	1748 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501		K7ENM7	598 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	CXCL11	O14625	94 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	TACC1	O75410	805 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	PRPF6	O94906	941 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	SLC25A27	O95847	323 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MYB	P10242	640 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	PLS3	P13797	630 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	TAL1	P17542	331 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	VAV2	P52735	878 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	IRX3	P78415	501 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MRPS9	P82933	396 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	CKAP4	Q07065	602 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MAPK8IP2	Q13387	824 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MTF1	Q14872	753 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	IFI16	Q16666	785 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	EXOC3L4	Q17RC7	722 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	WHAMMP3	Q1A5X7	153 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	TDRD12	Q587J7	1177 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	CCDC70	Q6NSX1	233 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MIS18BP1	Q6P0N0	1132 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	PDXDC1	Q6P996	788 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	KCNV1	Q6PIU1	500 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	SLC30A10	Q6XR72	485 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	INTS8	Q75QN2	995 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	RRAGA	Q7L523	313 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	FASTKD5	Q7L8L6	764 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ZNF720	Q7Z2F6	126 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ERO1B	Q86YB8	467 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	SLC9A9	Q8IVB4	645 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	EXOC8	Q8IYI6	725 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	FAM186B	Q8IYM0	893 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ANKRD35	Q8N283	1001 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	MCPH1	Q8NEM0	835 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	TMEM174	Q8WUU8	243 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ANKRD7	Q92527	254 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	GOLGA1	Q92805	767 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	EEF2KMT	Q96G04	330 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	INPP4A	Q96PE3	977 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	LSM14B	Q9BX40	385 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	IFIH1	Q9BYX4	1025 aa	Known RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ST6GALNAC4	Q9H4F1	302 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	AGPAT5	Q9NUQ2	364 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	COL20A1	Q9P218	1284 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	TSKS	Q9UJT2	592 aa		9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ZNF215	Q9UL58	517 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	ZNF214	Q9UL59	606 aa	Predicted RBP	9.12	□□□□□ -0.95
PNKP-231	ENST00000640501	LOC102724159	A0A0B4J2E5	919 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	ANO9	A1A5B4	782 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	IQCA1L	A6NCM1	817 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	UNCX	A6NJT0	531 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	LRRC53	A6NM62	1247 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	MAPK13	O15264	365 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	DHX15	O43143	795 aa	Known RBP	9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	EXOC3	O60645	756 aa		9.11	□□□□□ -0.95
PNKP-231	ENST00000640501	HIP1R	O75146	1068 aa		9.11	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms