RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PLIN2Q99541 437 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 NIFKQ9BYG3 293 aaKnown RBP14.77□□□□□ -0.05
GTF3A-209ENST00000640289 PPP1R12CQ9BZL4 782 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 RCOR1Q9UKL0 485 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 TBX21Q9UL17 535 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 MYH15Q9Y2K3 1946 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 COL1A2P08123 1366 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 C22orf31O95567 290 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 KLRC1P26715 233 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 PTK7Q13308 1070 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 GRB10Q13322 594 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 TARBP2Q15633 366 aaKnown RBP14.76□□□□□ -0.05
GTF3A-209ENST00000640289 CABP7Q86V35 215 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 SERINC5Q86VE9 423 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 KCNG4Q8TDN1 519 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 LEO1Q8WVC0 666 aaPredicted RBP14.76□□□□□ -0.05
GTF3A-209ENST00000640289 EPSTI1Q96J88 318 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 CEP170P1Q96L14 293 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 SPATA32Q96LK8 384 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 PNMA5Q96PV4 448 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 NOC4LQ9BVI4 516 aaKnown RBP14.76□□□□□ -0.05
GTF3A-209ENST00000640289 DDX19AQ9NUU7 478 aaKnown RBP14.76□□□□□ -0.05
GTF3A-209ENST00000640289 PCDHA7Q9UN72 937 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 KIAA1024Q9UPX6 916 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 STK24Q9Y6E0 443 aa14.76□□□□□ -0.05
GTF3A-209ENST00000640289 MKI67P46013 3256 aaKnown RBP14.76□□□□□ -0.05
GTF3A-209ENST00000640289 E9PMD0 336 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 KIAA0355O15063 1070 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 UBA7P41226 1012 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 ME1P48163 572 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 TRIM71Q2Q1W2 868 aaKnown RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 XKR9Q5GH70 373 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 AXDND1Q5T1B0 1012 aaPredicted RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 OTUD6AQ7L8S5 288 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 KCNK18Q7Z418 384 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 SYMPKQ92797 1274 aaKnown RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 FAM49AQ9H0Q0 323 aaPredicted RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 CYP26B1Q9NR63 512 aa14.75□□□□□ -0.05
GTF3A-209ENST00000640289 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
GTF3A-209ENST00000640289 CUTAO60888 179 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 MUTP22033 750 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 CYP2C18P33260 490 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 RARRES1P49788 294 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 CLCN3P51790 818 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 TBC1D8BQ0IIM8 1120 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 HYIQ5T013 277 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 LRRC71Q8N4P6 559 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 LRRC15Q8TF66 581 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 DNAJB3Q8WWF6 145 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 NACC1Q96RE7 527 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 ANKEF1Q9NU02 776 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 PRKAG2Q9UGJ0 569 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 PCDHA2Q9Y5H9 948 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 NR2E3Q9Y5X4 410 aa14.74□□□□□ -0.05
GTF3A-209ENST00000640289 KDM3AQ9Y4C1 1321 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 SMIM35A0A1B0GVV1 85 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 MAFO75444 373 aaPredicted RBP14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CTSHP09668 335 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CKBP12277 381 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 RAG1P15918 1043 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 THPOP40225 353 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CCL23P55773 120 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 DRP2Q13474 957 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 TMEM119Q4V9L6 283 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 EFCAB12Q6NXP0 572 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 TAF2Q6P1X5 1199 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 SHC4Q6S5L8 630 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 METTL13Q8N6R0 699 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 LINC01465Q8N7H1 131 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 SCLYQ96I15 445 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CDK5RAP3Q96JB5 506 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CCDC43Q96MW1 224 aaKnown RBP14.73□□□□□ -0.05
GTF3A-209ENST00000640289 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 SCAND2PQ9GZW5 306 aaPredicted RBP14.73□□□□□ -0.05
GTF3A-209ENST00000640289 WNT8AQ9H1J5 351 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 BHMT2Q9H2M3 363 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 SUGCTQ9HAC7 445 aa14.73□□□□□ -0.05
GTF3A-209ENST00000640289 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
GTF3A-209ENST00000640289 A0A087X0B3 334 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 IGKV6-21A0A0C4DH24 114 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 MAGEB2O15479 319 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 USO1O60763 962 aaKnown RBP14.72□□□□□ -0.05
GTF3A-209ENST00000640289 TIMP1P01033 207 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 XRCC6P12956 609 aaKnown RBP eCLIP14.72□□□□□ -0.05
GTF3A-209ENST00000640289 PLCG1P19174 1290 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 POLGP54098 1239 aaPredicted RBP14.72□□□□□ -0.05
GTF3A-209ENST00000640289 RBL2Q08999 1139 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 TMEM62Q0P6H9 643 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
GTF3A-209ENST00000640289 BFSP2Q13515 415 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 ZNF618Q5T7W0 954 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 TRAF7Q6Q0C0 670 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 KIAA0319LQ8IZA0 1049 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 CCDC155Q8N6L0 562 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 RASSF8Q8NHQ8 419 aa14.72□□□□□ -0.05
GTF3A-209ENST00000640289 CAGE1Q8TC20 777 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms