RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 SLFN11Q7Z7L1 901 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 NT5DC3Q86UY8 548 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 U2AF1L4Q8WU68 220 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 NR2E1Q9Y466 385 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 GOLGA6L7A0A1B0GV03 622 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 F8VZ95 297 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 DNM1LO00429 736 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 UFL1O94874 794 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 MAP2K2P36507 400 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 BYSLQ13895 437 aaKnown RBP11.9□□□□□ -0.51
SNIP1-204ENST00000638725 GIT2Q14161 759 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 PLCB4Q15147 1175 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 OSGEPQ9NPF4 335 aa11.9□□□□□ -0.51
SNIP1-204ENST00000638725 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.51
SNIP1-204ENST00000638725 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.51
SNIP1-204ENST00000638725 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 IGKV6D-41A0A0C4DH26 115 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 ZBTB5O15062 677 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 RGL2O15211 777 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 GABPAQ06546 454 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 DRP2Q13474 957 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 CCDC26Q8TAB7 109 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
SNIP1-204ENST00000638725 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 PHF20L1A8MW92 1017 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 CLIC2O15247 247 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 ATP2C2O75185 946 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 GFPT2O94808 682 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 TTLL1O95922 423 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 FGGP02679 453 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 GALCP54803 685 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 JAM2P57087 298 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 CATSPER3Q86XQ3 398 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 C3orf20Q8ND61 904 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 LNX1Q8TBB1 728 aaPredicted RBP11.89□□□□□ -0.51
SNIP1-204ENST00000638725 MDM1Q8TC05 714 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 HES6Q96HZ4 224 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 ACTR5Q9H9F9 607 aaPredicted RBP11.89□□□□□ -0.51
SNIP1-204ENST00000638725 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 ATP8A1Q9Y2Q0 1164 aa11.89□□□□□ -0.51
SNIP1-204ENST00000638725 GAKO14976 1311 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 C5orf60A6NFR6 353 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 PAEPP09466 180 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 COPB2P35606 906 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ANKRD20A8PQ5CZ79 823 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ADAT2Q7Z6V5 191 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 VPS36Q86VN1 386 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 TATDN2Q93075 761 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 PSMD1Q99460 953 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 UTP11Q9Y3A2 253 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 DAGLAQ9Y4D2 1042 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ASTN1O14525 1302 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 A0A0A6YYK5 440 aaPredicted RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 CHUKO15111 745 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 BUB1BO60566 1050 aaPredicted RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 NR3C1P04150 777 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 KCNA1Q09470 495 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 IFFO1Q0D2I5 559 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 C15orf52Q6ZUT6 534 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 SYCE1Q8N0S2 351 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ATP8B4Q8TF62 1192 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 A1CFQ9NQ94 594 aaKnown RBP11.88□□□□□ -0.51
SNIP1-204ENST00000638725 FAM114A2Q9NRY5 505 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 HAUS2Q9NVX0 235 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 AMFRQ9UKV5 643 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 IGSF9BQ9UPX0 1349 aa11.88□□□□□ -0.51
SNIP1-204ENST00000638725 CALUO43852 315 aaPredicted RBP11.87□□□□□ -0.51
SNIP1-204ENST00000638725 RAD21O60216 631 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 IL1R1P14778 569 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 SPIRE1Q08AE8 756 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 PRPF4BQ13523 1007 aaKnown RBP11.87□□□□□ -0.51
SNIP1-204ENST00000638725 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 GLYCTKQ8IVS8 523 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 OLIG1Q8TAK6 271 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms