RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TJP3O95049 919 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 FGFR1OPO95684 399 aaKnown RBP13.02□□□□□ -0.33
CAPN3-221ENST00000638141 PTGDRQ13258 359 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 RASA3Q14644 834 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 KPNB1Q14974 876 aaKnown RBP13.02□□□□□ -0.33
CAPN3-221ENST00000638141 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
CAPN3-221ENST00000638141 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
CAPN3-221ENST00000638141 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 PHC3Q8NDX5 983 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 NEK9Q8TD19 979 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 FMO2Q99518 471 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 MIS12Q9H081 205 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-221ENST00000638141 WDR37Q9Y2I8 494 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.33
CAPN3-221ENST00000638141 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 SMAPO00193 183 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MYBL1P10243 752 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MUM1Q2TAK8 710 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 GBP5Q96PP8 586 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 NR1H4Q96RI1 486 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 DISC1Q9NRI5 854 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 DENND2AQ9ULE3 1009 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 DAPK3O43293 454 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 FTCDO95954 541 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 Q4G0T1 1027 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF654Q8IZM8 581 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 IRGQQ8WZA9 623 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 MAF1Q9H063 256 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 RNF41Q9H4P4 317 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
CAPN3-221ENST00000638141 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
CAPN3-221ENST00000638141 TMEM221A6NGB7 291 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 EIF4E1BA6NMX2 242 aaKnown RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 TRAFD1O14545 582 aaPredicted RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 AFPP02771 609 aaKnown RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 FAM200BP0CF97 657 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 YY1P25490 414 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 C10orf76Q5T2E6 689 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC43Q8N309 656 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 FAM13CQ8NE31 585 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 ANKS1AQ92625 1134 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 STRBPQ96SI9 672 aaKnown RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 NAP1L3Q99457 506 aaPredicted RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 SPATA16Q9BXB7 569 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 OCEL1Q9H607 264 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 NMRK1Q9NWW6 199 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 IL1RAPL1Q9NZN1 696 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 TBC1D30Q9Y2I9 924 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 SOCS7O14512 581 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 OATP04181 439 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
CAPN3-221ENST00000638141 SULT2A1Q06520 285 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 EHHADHQ08426 723 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF174Q15697 407 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 MAN2A1Q16706 1144 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 VWA3BQ502W6 1294 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 DENND2CQ68D51 928 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 ZMYND12Q9H0C1 365 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 TLE6Q9H808 572 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC4CQ9HCJ2 640 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
CAPN3-221ENST00000638141 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 SERPING1P05155 500 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms