RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 OR8K1Q8NGG5 319 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 ZNF212Q9UDV6 495 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 KRT7P08729 469 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 CPB1P15086 417 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 TSPY1Q01534 308 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 ATXN7L3BQ96GX2 97 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 NEUROD4Q9HD90 331 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 HYOU1Q9Y4L1 999 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 WDR17Q8IZU2 1322 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 RFX3P48380 749 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 SPDYE7PQ495Y7 208 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 PPP6R3Q5H9R7 873 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 DPF3Q92784 378 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 ZBTB18Q99592 522 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 MED7O43513 233 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 MRPS15P82914 257 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 ADAM9Q13443 819 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 RGS9BPQ6ZS82 235 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 DONSONQ9NYP3 566 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 USE1Q9NZ43 259 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 NUP160Q12769 1436 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 PNMA1Q8ND90 353 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 ERLEC1Q96DZ1 483 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 COL4A3BPQ9Y5P4 624 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 MYO1FO00160 1098 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 NEK2P51955 445 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 NDE1Q9NXR1 346 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 DSCC1Q9BVC3 393 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
CACNA1A-258ENST00000638029 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 SGSM2O43147 1006 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 HSPA6P17066 643 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 KCNA6P17658 529 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 PASD1Q8IV76 773 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 ARHGAP26Q9UNA1 814 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 TRIM15Q9C019 465 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 ZNF229Q9UJW7 825 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 PIK3R2O00459 728 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 BHMTQ93088 406 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 GINM1Q9NU53 330 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 DFFAO00273 331 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 SPDYAQ5MJ70 313 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 CATSPER4Q7RTX7 472 aa17.47■□□□□ 0.39
CACNA1A-258ENST00000638029 MAST1Q9Y2H9 1570 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 MOCS2O96007 188 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ERFP50548 548 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 DPYDQ12882 1025 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 TRIM32Q13049 653 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 YIPF3Q9GZM5 350 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 TRIM45Q9H8W5 580 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 HEY1Q9Y5J3 304 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 C2CD2LO14523 706 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 GADD45BO75293 160 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 RAB42Q8N4Z0 105 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ZMYM6O95789 1325 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ZBTB7AO95365 584 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 RPN1P04843 607 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 CUL1Q13616 776 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ARHGEF10O15013 1369 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 NUMBP49757 651 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 SLC7A5Q01650 507 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ALFQ53S48 1182 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 XPO4Q9C0E2 1151 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 UBE2TQ9NPD8 197 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 GTF2A1LQ9UNN4 478 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 GNAT1P11488 350 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ZNF341Q9BYN7 854 aa17.46■□□□□ 0.39
CACNA1A-258ENST00000638029 ZNF827Q17R98 1081 aa17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 PRR23CQ6ZRP0 262 aa17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 KRT77Q7Z794 578 aa17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 PNMA3Q9UL41 463 aa17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 PACSIN2Q9UNF0 486 aaPredicted RBP17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 CACNA1FO60840 1977 aa17.46■□□□□ 0.38
CACNA1A-258ENST00000638029 CENPTQ96BT3 561 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 SP110Q9HB58 689 aa17.45■□□□□ 0.38
CACNA1A-258ENST00000638029 ADA2Q9NZK5 511 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms