RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 L3MBTL1Q9Y468 752 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 XDHP47989 1333 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 SLC16A1P53985 500 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 TWF2Q6IBS0 349 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 DDIASQ8IXT1 998 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 CAPS2Q9BXY5 557 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 AOX1Q06278 1338 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 SYDE2Q5VT97 1194 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 ULK4Q96C45 1275 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 NDE1Q9NXR1 346 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 ADORA2BP29275 332 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 HEMGNQ9BXL5 484 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 PPARGC1AQ9UBK2 798 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 N6AMT1Q9Y5N5 214 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 ACSL3O95573 720 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 RPF1Q9H9Y2 349 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 ARHGAP26Q9UNA1 814 aa18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-253ENST00000637927 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.5
CACNA1A-253ENST00000637927 C2CD2LO14523 706 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 CARSP49589 748 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 COPB1P53618 953 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 COPB2P35606 906 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 SLC7A3Q8WY07 619 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 EIF3CLB5ME19 914 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 H0Y3Z8 333 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 PLEKHM3Q6ZWE6 761 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 ZNF274Q96GC6 653 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 DNAJC8O75937 253 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 MAP2K2P36507 400 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 SPDYAQ5MJ70 313 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 KLHL29Q96CT2 875 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 PALMDQ9NP74 551 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 V9GYQ6 96 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 MYO1FO00160 1098 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 GCNT4Q9P109 453 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 SCOCQ9UIL1 159 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 HSPA4LO95757 839 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 RASSF3Q86WH2 238 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 ZFP42Q96MM3 310 aa18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 PNMA8BQ9ULN7 279 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-253ENST00000637927 ADCY3O60266 1144 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 PDHA1P08559 390 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 LCP1P13796 627 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 DNAJC24Q6P3W2 148 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 AMNQ9BXJ7 453 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 MCF2P10911 925 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 NR5A1Q13285 461 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 KLC3Q6P597 504 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 C10orf53Q8N6V4 93 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 LARP4BQ92615 738 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 PCDHA5Q9Y5H7 936 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 LRRD1A4D1F6 860 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 PIGOQ8TEQ8 1089 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 ACCSQ96QU6 501 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 TUBGCP2Q9BSJ2 902 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 CCNA1P78396 465 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 DMC1Q14565 340 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 RNF207Q6ZRF8 634 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 INTS9Q9NV88 658 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 TBX22Q9Y458 520 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 A0A0G2JND7 137 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 MT-ND3P03897 115 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 CPB1P15086 417 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 FSCBQ5H9T9 825 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 RRM2BQ7LG56 351 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 SPZ1Q9BXG8 430 aa18.19■□□□□ 0.5
CACNA1A-253ENST00000637927 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 TUBB2AQ13885 445 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 CCDC142Q17RM4 750 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ARMC2Q8NEN0 867 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 TUBB2BQ9BVA1 445 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 SLC13A1Q9BZW2 595 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ARHGEF6Q15052 776 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 SNCBQ16143 134 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 TYW1Q9NV66 732 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 UNC5CLQ8IV45 518 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 MAP7D3Q8IWC1 876 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 CCNYL1Q8N7R7 359 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ING2Q9H160 280 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 VPS11Q9H270 941 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 EPB41L5Q9HCM4 733 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PFKFB2O60825 505 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms