RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CTNND2Q9UQB3 1225 aa23.39■■□□□ 1.33
CLN8-213ENST00000637156 NFE2L3Q9Y4A8 694 aa23.39■■□□□ 1.33
CLN8-213ENST00000637156 NOP56O00567 594 aaKnown RBP23.38■■□□□ 1.33
CLN8-213ENST00000637156 SP3Q02447 781 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 PAK1Q13153 545 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 XKR3Q5GH77 459 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 DAW1Q8N136 415 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 DHTKD1Q96HY7 919 aaPredicted RBP23.38■■□□□ 1.33
CLN8-213ENST00000637156 CEP170P1Q96L14 293 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 APBA2Q99767 749 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 GABRQQ9UN88 632 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 COL4A3BPQ9Y5P4 624 aa23.38■■□□□ 1.33
CLN8-213ENST00000637156 ADCY6O43306 1168 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 ZNF865P0CJ78 1059 aaPredicted RBP23.37■■□□□ 1.33
CLN8-213ENST00000637156 ZNF131P52739 623 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 MAPK7Q13164 816 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 DUSP28Q4G0W2 176 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 SPATA1Q5VX52 437 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 MAEAQ7L5Y9 396 aa23.37■■□□□ 1.33
CLN8-213ENST00000637156 LGR5O75473 907 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 GH1P01241 217 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 STIM1Q13586 685 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 SFR1Q86XK3 245 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 EMID1Q96A84 441 aaPredicted RBP23.36■■□□□ 1.33
CLN8-213ENST00000637156 ODF2LQ9ULJ1 636 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 HIP1RO75146 1068 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 XRCC5P13010 732 aaKnown RBP23.36■■□□□ 1.33
CLN8-213ENST00000637156 ATP1A3P13637 1013 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 GUF1Q8N442 669 aaKnown RBP23.36■■□□□ 1.33
CLN8-213ENST00000637156 CYP26B1Q9NR63 512 aa23.36■■□□□ 1.33
CLN8-213ENST00000637156 SAMSN1Q9NSI8 373 aaKnown RBP23.36■■□□□ 1.33
CLN8-213ENST00000637156 TRIM49BA6NDI0 452 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 PSMA7O14818 248 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 USO1O60763 962 aaKnown RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 TBCAO75347 108 aaKnown RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 ADCY5O95622 1261 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 OATP04181 439 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 FLT3LGP49771 235 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 CASP5P51878 434 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 FAM160B1Q5W0V3 765 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 MYCT1Q8N699 235 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 ANP32BQ92688 251 aaKnown RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 CCDC43Q96MW1 224 aaKnown RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 NIFKQ9BYG3 293 aaKnown RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 SEMA6BQ9H3T3 888 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 AZI2Q9H6S1 392 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 PARVGQ9HBI0 331 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 PDLIM7Q9NR12 457 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 SEPT9Q9UHD8 586 aaPredicted RBP23.35■■□□□ 1.33
CLN8-213ENST00000637156 SYNRGQ9UMZ2 1314 aa23.35■■□□□ 1.33
CLN8-213ENST00000637156 FAM13AO94988 1023 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 ZNF18P17022 549 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 CCNE1P24864 410 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 IRF5Q13568 498 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 ANKRD40Q6AI12 368 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 CENPPQ6IPU0 288 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 PLPPR4Q7Z2D5 763 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 TRIM50Q86XT4 487 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 AFG1LQ8WV93 481 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 SCFD1Q8WVM8 642 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 GLG1Q92896 1179 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 FIZ1Q96SL8 496 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 GAP43P17677 238 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 PPP1R2P41236 205 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 TNFAIP2Q03169 654 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 HSP90AA4PQ58FG1 418 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 SARM1Q6SZW1 724 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 PPTC7Q8NI37 304 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 P2RX5Q93086 422 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 CEP89Q96ST8 783 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 OLFML3Q9NRN5 406 aa23.34■■□□□ 1.33
CLN8-213ENST00000637156 TPM4P67936 248 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 PRKCZQ05513 592 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 TTI2Q6NXR4 508 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 MYOCDQ8IZQ8 938 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 MRPL44Q9H9J2 332 aaKnown RBP23.33■■□□□ 1.33
CLN8-213ENST00000637156 GPRC5CQ9NQ84 441 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 NRBP2Q9NSY0 501 aa23.33■■□□□ 1.33
CLN8-213ENST00000637156 GNEQ9Y223 722 aaKnown RBP23.33■■□□□ 1.33
CLN8-213ENST00000637156 MTERF2Q49AM1 385 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 EPM2AIP1Q7L775 607 aaPredicted RBP23.32■■□□□ 1.32
CLN8-213ENST00000637156 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 DUSP9Q99956 384 aaKnown RBP23.32■■□□□ 1.32
CLN8-213ENST00000637156 EMSYQ7Z589 1322 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 NKRFO15226 690 aaKnown RBP eCLIP23.32■■□□□ 1.32
CLN8-213ENST00000637156 DGAT1O75907 488 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 TARBP2Q15633 366 aaKnown RBP23.32■■□□□ 1.32
CLN8-213ENST00000637156 ODR4Q5SWX8 454 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 ZNF720Q7Z2F6 126 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 TIPINQ9BVW5 301 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 TRIM5Q9C035 493 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 SMARCAD1Q9H4L7 1026 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 WDR81Q562E7 1941 aa23.32■■□□□ 1.32
CLN8-213ENST00000637156 PPFIA4O75335 1185 aa23.31■■□□□ 1.32
CLN8-213ENST00000637156 MYBP10242 640 aa23.31■■□□□ 1.32
CLN8-213ENST00000637156 MARK3P27448 753 aa23.31■■□□□ 1.32
CLN8-213ENST00000637156 NMT1P30419 496 aaKnown RBP23.31■■□□□ 1.32
CLN8-213ENST00000637156 KIF22Q14807 665 aa23.31■■□□□ 1.32
CLN8-213ENST00000637156 TRIB2Q92519 343 aa23.31■■□□□ 1.32
CLN8-213ENST00000637156 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms