RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 NUP98P52948 1817 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 A0A0A6YYK5 440 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 GOLGA6L10A0A0M3HER8 536 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 MECOMQ03112 1051 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 COASYQ13057 564 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 ZNF571Q7Z3V5 609 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 VPS36Q86VN1 386 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 ATXN2LQ8WWM7 1075 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 THOC1Q96FV9 657 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 MCM9Q9NXL9 1143 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 DENND2CQ68D51 928 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 IRF2BP2Q7Z5L9 587 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 NEK9Q8TD19 979 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 PABPC3Q9H361 631 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 CCDC134Q9H6E4 229 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 INTS9Q9NV88 658 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 TTC7AQ9ULT0 858 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 KLRF2D3W0D1 207 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 REXO1Q8N1G1 1221 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 STXBP5LQ9Y2K9 1186 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 MYH7BA7E2Y1 1941 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 NPEPPSP55786 919 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 NAIF1Q69YI7 327 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 H2AFVQ71UI9 128 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 LRRC34Q8IZ02 419 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 MKNK2Q9HBH9 465 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
CACNA1A-235ENST00000637004 SOCS7O14512 581 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 RGS16O15492 202 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 GRIK3Q13003 919 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 TMEM119Q4V9L6 283 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 STMN4Q9H169 189 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 TRPC6Q9Y210 931 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 DIS3Q9Y2L1 958 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 ALADP13716 330 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 GCKP35557 465 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 PMS2P54278 862 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 PTPROQ16827 1216 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 NAP1L3Q99457 506 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 PLCD4Q9BRC7 762 aa16.91■□□□□ 0.3
CACNA1A-235ENST00000637004 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 AGTP01019 485 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 NQO1P15559 274 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 CCND1P24385 295 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 PRKCIP41743 596 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 ZNF131P52739 623 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 BZW1Q7L1Q6 419 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 NT5DC3Q86UY8 548 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 GBP7Q8N8V2 638 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 ATP8B4Q8TF62 1192 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 DNAJC19Q96DA6 116 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 SPDL1Q96EA4 605 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 TRIM31Q9BZY9 425 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 AMFRQ9UKV5 643 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 PDE6CP51160 858 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 PTENP60484 403 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 AGAP11Q8TF27 550 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 ERP44Q9BS26 406 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 MOV10L1Q9BXT6 1211 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
CACNA1A-235ENST00000637004 TLDC2A0PJX2 215 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 CETN3O15182 167 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 FGGP02679 453 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 UCHL3P15374 230 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 DR1Q01658 176 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 ADCY2Q08462 1091 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 ADAM9Q13443 819 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 C11orf91Q3C1V1 193 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 INTS5Q6P9B9 1019 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms