RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NACC1Q96RE7 527 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 LXNQ9BS40 222 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 POLR3CQ9BUI4 534 aaPredicted RBP9.2□□□□□ -0.94
PNKP-226ENST00000636840 FAM49AQ9H0Q0 323 aaPredicted RBP9.2□□□□□ -0.94
PNKP-226ENST00000636840 SUGCTQ9HAC7 445 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 TUFT1Q9NNX1 390 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 ANKEF1Q9NU02 776 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 UMODL1Q5DID0 1318 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 IGSF9BQ9UPX0 1349 aa9.2□□□□□ -0.94
PNKP-226ENST00000636840 TRIP12Q14669 1992 aaPredicted RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 ABHD14A-ACY1A0A1B0GW23 586 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 GAS2O43903 313 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 LYPLA2O95372 231 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CTSHP09668 335 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 RPA1P27694 616 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 YWHABP31946 246 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 CCT6AP40227 531 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 RFC5P40937 340 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 KCNJ6P48051 423 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 MRPS6P82932 125 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CTTNQ14247 550 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 HIC1Q14526 733 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 SHHQ15465 462 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 TRIM71Q2Q1W2 868 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 HABP4Q5JVS0 413 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 FAM26DQ5JW98 314 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 MARCH8Q5T0T0 291 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CNKSR3Q6P9H4 555 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 TRAPPC12Q8WVT3 735 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 APBB2Q92870 758 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CDK5RAP3Q96JB5 506 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 SCLT1Q96NL6 688 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CTAGE1Q96RT6 745 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 HSD17B14Q9BPX1 270 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.94
PNKP-226ENST00000636840 CELF4Q9BZC1 486 aaKnown RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 INO80BQ9C086 356 aaPredicted RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 WNT8AQ9H1J5 351 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 CYP26B1Q9NR63 512 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
PNKP-226ENST00000636840 RGL1Q9NZL6 768 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 MTMR6Q9Y217 621 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 AKT3Q9Y243 479 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 TRPV2Q9Y5S1 764 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 SLC4A7Q9Y6M7 1214 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 SQORQ9Y6N5 450 aa9.19□□□□□ -0.94
PNKP-226ENST00000636840 POTEMA6NI47 508 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 WNT7AO00755 349 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 ASAP2O43150 1006 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 MAFO75444 373 aaPredicted RBP9.18□□□□□ -0.94
PNKP-226ENST00000636840 BAIAP3O94812 1187 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 UBA7P41226 1012 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
PNKP-226ENST00000636840 ATP2C1P98194 919 aaPredicted RBP9.18□□□□□ -0.94
PNKP-226ENST00000636840 SPIRE1Q08AE8 756 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 NBR1Q14596 966 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 SF3A1Q15459 793 aaKnown RBP9.18□□□□□ -0.94
PNKP-226ENST00000636840 TARBP2Q15633 366 aaKnown RBP9.18□□□□□ -0.94
PNKP-226ENST00000636840 UGCGQ16739 394 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 LRIT3Q3SXY7 679 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 RUFY4Q6ZNE9 571 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 OTOP2Q7RTS6 562 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 KIAA0319LQ8IZA0 1049 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 SNX29Q8TEQ0 813 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 TCP11Q8WWU5 503 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 HERVK_113Q902F9 699 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 AK8Q96MA6 479 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 NT5C3AQ9H0P0 336 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 DNM3Q9UQ16 869 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 GINS2Q9Y248 185 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 ATP6V1DQ9Y5K8 247 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 CDY2AQ9Y6F7 541 aa9.18□□□□□ -0.94
PNKP-226ENST00000636840 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 GPR182O15218 404 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 SLC26A4O43511 780 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 DGAT1O75907 488 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 C22orf31O95567 290 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 CXCL10P02778 98 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 ZSCAN22P10073 491 aaPredicted RBP9.17□□□□□ -0.94
PNKP-226ENST00000636840 LONP1P36776 959 aaKnown RBP9.17□□□□□ -0.94
PNKP-226ENST00000636840 CRYBB1P53674 252 aaPredicted RBP9.17□□□□□ -0.94
PNKP-226ENST00000636840 ANO5Q75V66 913 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 CATSPER3Q86XQ3 398 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 IGSF22Q8N9C0 903 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 DBF4BQ8NFT6 615 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 RASSF8Q8NHQ8 419 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 PHOSPHO2Q8TCD6 241 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 CALML4Q96GE6 196 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 FTHL17Q9BXU8 183 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 IFIH1Q9BYX4 1025 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms