RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 METTL13Q8N6R0 699 aa20.27■□□□□ 0.84
PNKP-225ENST00000636214 MRPL38Q96DV4 380 aaKnown RBP20.27■□□□□ 0.84
PNKP-225ENST00000636214 LARP6Q9BRS8 491 aaKnown RBP20.27■□□□□ 0.84
PNKP-225ENST00000636214 TEKT3Q9BXF9 490 aa20.27■□□□□ 0.84
PNKP-225ENST00000636214 AGO3Q9H9G7 860 aaKnown RBP20.27■□□□□ 0.84
PNKP-225ENST00000636214 GABBR1Q9UBS5 961 aa20.27■□□□□ 0.84
PNKP-225ENST00000636214 PADI3Q9ULW8 664 aa20.27■□□□□ 0.84
PNKP-225ENST00000636214 H3BNC9 293 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 KCNQ1P51787 676 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 JAK3P52333 1124 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 NFX1Q12986 1120 aaKnown RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 GALNT17Q6IS24 598 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 FAM43BQ6ZT52 329 aaPredicted RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 NPAS4Q8IUM7 802 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 BLIDQ8IZY5 108 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 TBCKQ8TEA7 893 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 C11orf84Q9BUA3 381 aaPredicted RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 DISC1Q9NRI5 854 aa20.26■□□□□ 0.83
PNKP-225ENST00000636214 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 MAFBQ9Y5Q3 323 aaPredicted RBP20.26■□□□□ 0.83
PNKP-225ENST00000636214 MSH4O15457 936 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 CHMP2AO43633 222 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 RPS6KA5O75582 802 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 IBSPP21815 317 aaPredicted RBP20.25■□□□□ 0.83
PNKP-225ENST00000636214 TMOD1P28289 359 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 SFNP31947 248 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 MAP7D2Q96T17 732 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 RIT2Q99578 217 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 NRBP2Q9NSY0 501 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 MYO7AQ13402 2215 aa20.25■□□□□ 0.83
PNKP-225ENST00000636214 DENND3A2RUS2 1198 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 MAGEB2O15479 319 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 RB1P06400 928 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 BMP1P13497 986 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 NONOQ15233 471 aaKnown RBP eCLIP20.24■□□□□ 0.83
PNKP-225ENST00000636214 ANKRD1Q15327 319 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 KRT25Q7Z3Z0 450 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 KIAA0319LQ8IZA0 1049 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 LENG9Q96B70 501 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 AKT3Q9Y243 479 aa20.24■□□□□ 0.83
PNKP-225ENST00000636214 BDP1A6H8Y1 2624 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 GPR182O15218 404 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 C22orf31O95567 290 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 TMEM266Q2M3C6 531 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 MIER3Q7Z3K6 550 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 DAGLBQ8NCG7 672 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 SCLT1Q96NL6 688 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 PPP1R16BQ96T49 567 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 UBE2ZQ9H832 354 aaPredicted RBP20.23■□□□□ 0.83
PNKP-225ENST00000636214 WDR81Q562E7 1941 aa20.23■□□□□ 0.83
PNKP-225ENST00000636214 XIRP2A4UGR9 3374 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 OATP04181 439 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 ATP4AP20648 1035 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 BMPR1AP36894 532 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 ANAPC15P60006 121 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 Q4G0T1 1027 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 EP400NLQ6ZTU2 488 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 CMTR2Q8IYT2 770 aaKnown RBP20.22■□□□□ 0.83
PNKP-225ENST00000636214 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 LINC01599Q8WXQ3 324 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 SLC5A5Q92911 643 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 LMAN2LQ9H0V9 348 aa20.22■□□□□ 0.83
PNKP-225ENST00000636214 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
PNKP-225ENST00000636214 ZBTB42B2RXF5 422 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 DGKIO75912 1065 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
PNKP-225ENST00000636214 PRKCEQ02156 737 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 KIZQ2M2Z5 673 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 RDM1Q8NG50 284 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 WASF1Q92558 559 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 OSMRQ99650 979 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 PLVAPQ9BX97 442 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 C1orf112Q9NSG2 853 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 NOC2LQ9Y3T9 749 aaKnown RBP20.21■□□□□ 0.83
PNKP-225ENST00000636214 PCDHB7Q9Y5E2 793 aa20.21■□□□□ 0.83
PNKP-225ENST00000636214 TDP2O95551 362 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 VTNP04004 478 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 KCNA5P22460 613 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 SARSP49591 514 aaKnown RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 CLCN3P51790 818 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 SCRN1Q12765 414 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 PAN2Q504Q3 1202 aaKnown RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 SPOUT1Q5T280 376 aaKnown RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 EFCAB12Q6NXP0 572 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 MOXD1Q6UVY6 613 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 CLP1Q92989 425 aaKnown RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 ZNF689Q96CS4 500 aaPredicted RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 AIFM3Q96NN9 605 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 NECAB3Q96P71 396 aaPredicted RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 RC3H2Q9HBD1 1191 aaKnown RBP20.2■□□□□ 0.82
PNKP-225ENST00000636214 ERVK-5Q9HDB9 667 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 DDX25Q9UHL0 483 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms