RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	GLG1	Q92896	1179 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	FAM167A	Q96KS9	214 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	REEP2	Q9BRK0	252 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	C16orf70	Q9BSU1	422 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CYP26B1	Q9NR63	512 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ANO10	Q9NW15	660 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ERAP1	Q9NZ08	941 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	TRIM17	Q9Y577	477 aa		10.66	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CAVIN2	O95810	425 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	KRT18	P05783	430 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	IDE	P14735	1019 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CCND3	P30281	292 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CPT1A	P50416	773 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	GJA9	P57773	515 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	NKX3-2	P78367	333 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CACNB1	Q02641	598 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	GSE1	Q14687	1217 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	PLCB4	Q15147	1175 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	TARBP2	Q15633	366 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ANO6	Q4KMQ2	910 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	XKR9	Q5GH70	373 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CCDC65	Q8IXS2	484 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ATP8B4	Q8TF62	1192 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CCDC47	Q96A33	483 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CEP170P1	Q96L14	293 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CCDC43	Q96MW1	224 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	CEP89	Q96ST8	783 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	SH2D3A	Q9BRG2	576 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	TIPIN	Q9BVW5	301 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	GTPBP4	Q9BZE4	634 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	AP5M1	Q9H0R1	490 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	UPF3A	Q9H1J1	476 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	DNAJC25	Q9H1X3	360 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	NRBP2	Q9NSY0	501 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	EXOC1	Q9NV70	894 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	PANK4	Q9NVE7	773 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	ODF2L	Q9ULJ1	636 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	PTCH2	Q9Y6C5	1203 aa		10.65	□□□□□ -0.7
CACNA1A-223	ENST00000636058	PCNT	O95613	3336 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SYNRG	Q9UMZ2	1314 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RSPH10B2	B2RC85	870 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	USO1	O60763	962 aa	Known RBP	10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DGAT1	O75907	488 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	F2	P00734	622 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	INHA	P05111	366 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RSPH10B	P0C881	870 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZNF286B	P0CG31	522 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RARB	P10826	455 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MARK3	P27448	753 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CNGA1	P29973	690 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GRK4	P32298	578 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZNF131	P52739	623 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	IRX5	P78411	483 aa	Predicted RBP	10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RAD51AP2	Q09MP3	1159 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	COASY	Q13057	564 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAPK7	Q13164	816 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PSMD2	Q13200	908 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DAW1	Q8N136	415 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MLKL	Q8NB16	471 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RNPEP	Q9H4A4	650 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PDLIM7	Q9NR12	457 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZNF215	Q9UL58	517 aa	Predicted RBP	10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PTPN22	Q9Y2R2	807 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PPME1	Q9Y570	386 aa		10.64	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FSD2	A1L4K1	749 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MYADML2	A6NDP7	307 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZBTB42	B2RXF5	422 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058		H3BRB1	525 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HBP1	O60381	514 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HIP1R	O75146	1068 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ADAMTS4	O75173	837 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TBCA	O75347	108 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GAP43	P17677	238 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RFC5	P40937	340 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	STK4	Q13043	487 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FSCN1	Q16658	493 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MTERF2	Q49AM1	385 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	COBLL1	Q53SF7	1204 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	BRDT	Q58F21	947 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KIAA0895	Q8NCT3	520 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MCPH1	Q8NEM0	835 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HPS3	Q969F9	1004 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	BPIFA3	Q9BQP9	254 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	NAT10	Q9H0A0	1025 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RBSN	Q9H1K0	784 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TUT1	Q9H6E5	874 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DHX33	Q9H6R0	707 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ATP6V0A4	Q9HBG4	840 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	XPNPEP1	Q9NQW7	623 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DDX20	Q9UHI6	824 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DACH1	Q9UI36	760 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GDA	Q9Y2T3	454 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PCDHA2	Q9Y5H9	948 aa		10.63	□□□□□ -0.71
CACNA1A-223	ENST00000636058	COL4A3BP	Q9Y5P4	624 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms