RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 GPBP1Q86WP2 473 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 CUL5Q93034 780 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 PABPC3Q9H361 631 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 NOD2Q9HC29 1040 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 METTL14Q9HCE5 456 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SLC12A4Q9UP95 1085 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 BACH1O14867 736 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 MMEP08473 750 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 FERP16591 822 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 GBP1P32455 592 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 MMP13P45452 471 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 NOVP48745 357 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 TNNI2P48788 182 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 DRG2P55039 364 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SLC8A3P57103 927 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 ASPRV1Q53RT3 343 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 HIBCHQ6NVY1 386 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 TLDC1Q6P9B6 456 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 CCDC63Q8NA47 563 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 RSRC1Q96IZ7 334 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 FGFBP2Q9BYJ0 223 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 NSRP1Q9H0G5 558 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 STMN4Q9H169 189 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 CCDC134Q9H6E4 229 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 PNMA2Q9UL42 364 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SNED1Q8TER0 1413 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CAND2O75155 1236 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CHN1P15882 459 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CLNS1AP54105 237 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 DR1Q01658 176 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 DHX34Q14147 1143 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 E2F5Q15329 346 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 DENND2CQ68D51 928 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 HAS1Q92839 578 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 ERP44Q9BS26 406 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CELF4Q9BZC1 486 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 DAAM1Q9Y4D1 1078 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 FGGP02679 453 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 GBP2P32456 591 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 PMS2P54278 862 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 DUPD1Q68J44 220 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 COA7Q96BR5 231 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CARD9Q9H257 536 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 CNOT7Q9UIV1 285 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 KIAA1024Q9UPX6 916 aa16.09■□□□□ 0.17
CACNA1A-220ENST00000635988 NAV1Q8NEY1 1877 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 RGL2O15211 777 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 CALUO43852 315 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 AGTP01019 485 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 CYP11B2P19099 503 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 JAM2P57087 298 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 ITPK1Q13572 414 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 SLMAPQ14BN4 828 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 C6orf118Q5T5N4 469 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 PROCA1Q8NCQ7 364 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 CEP95Q96GE4 821 aa16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-220ENST00000635988 GTPBP10A4D1E9 387 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 USP17L5A8MUK1 530 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 E9PMD0 336 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 SCP2P22307 547 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 PPARDQ03181 441 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 ADCY2Q08462 1091 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 EPHA7Q15375 998 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 ATXN2LQ8WWM7 1075 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 RFFLQ8WZ73 363 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 SELENOSQ9BQE4 189 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 ZDHHC18Q9NUE0 388 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 BAIAP2L1Q9UHR4 511 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 JAG2Q9Y219 1238 aa16.08■□□□□ 0.16
CACNA1A-220ENST00000635988 NCANO14594 1321 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 TAF1P21675 1872 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 PDXKO00764 312 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 OPLAHO14841 1288 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 RGS16O15492 202 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 LMNB1P20700 586 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 PTPROQ16827 1216 aa16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-220ENST00000635988 TRIM51Q9BSJ1 452 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms