RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 SRGAP2CP0DJJ0 459 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 MRE11P49959 708 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 GABREP78334 506 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 LACTBP83111 547 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-211ENST00000635893 CD83Q01151 205 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 HHEXQ03014 270 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 KANK2Q63ZY3 851 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 TMEM200BQ69YZ2 307 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 FILIP1Q7Z7B0 1213 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 ADGRE4PQ86SQ3 457 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 RTKN2Q8IZC4 609 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-211ENST00000635893 AMNQ9BXJ7 453 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 IKZF4Q9H2S9 585 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 ZNF703Q9H7S9 590 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-211ENST00000635893 SMURF1Q9HCE7 757 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 TLR9Q9NR96 1032 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 Q9UFV3 132 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 MSRB2Q9Y3D2 182 aa5.14□□□□□ -1.59
SCN1A-211ENST00000635893 CCDC66A2RUB6 948 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 PMS2P1A4D2B8 440 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 U2SURPO15042 1029 aaKnown RBP5.13□□□□□ -1.59
SCN1A-211ENST00000635893 INHBCP55103 352 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 TUBA3CQ13748 450 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 RASGRF1Q13972 1273 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 FAM209AQ5JX71 171 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 TUBA3EQ6PEY2 450 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 ZC3H7AQ8IWR0 971 aaKnown RBP5.13□□□□□ -1.59
SCN1A-211ENST00000635893 GPR135Q8IZ08 494 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 NEU4Q8WWR8 484 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-211ENST00000635893 OR10A5Q9H207 317 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 UCKL1Q9NWZ5 548 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 PCDHA9Q9Y5H5 950 aa5.13□□□□□ -1.59
SCN1A-211ENST00000635893 KCNK3O14649 394 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 DNM2P50570 870 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 HGFACQ04756 655 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
SCN1A-211ENST00000635893 MOGSQ13724 837 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 GRM7Q14831 915 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 SEC23AQ15436 765 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 GRAMD4Q6IC98 578 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 LRSAM1Q6UWE0 723 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 SGMS1Q86VZ5 419 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 CKAP2LQ8IYA6 745 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
SCN1A-211ENST00000635893 A0A087X1B8 175 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 SLC26A4O43511 780 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 STK10O94804 968 aaKnown RBP5.11□□□□□ -1.59
SCN1A-211ENST00000635893 CRTAMO95727 393 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 ADH4P08319 380 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 MMEP08473 750 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 FNDC7Q5VTL7 733 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 HOMEZQ8IX15 550 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 THEMISQ8N1K5 641 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-211ENST00000635893 D2HGDHQ8N465 521 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 SHCBP1Q8NEM2 672 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 OR14K1Q8NGZ2 314 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 ZNF483Q8TF39 744 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-211ENST00000635893 CCDC113Q9H0I3 377 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 PFDN2Q9UHV9 154 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 FAM184BQ9ULE4 1060 aa5.11□□□□□ -1.59
SCN1A-211ENST00000635893 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 CYP27B1O15528 508 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 APPP05067 770 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 MAKP20794 623 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 LONRF2Q1L5Z9 754 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 TMPRSS6Q8IU80 811 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 NOSTRINQ8IVI9 506 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 ASB15Q8WXK1 588 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 DHRS4Q9BTZ2 278 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 MMRN2Q9H8L6 949 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 KCNH7Q9NS40 1196 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 ASB1Q9Y576 335 aa5.1□□□□□ -1.59
SCN1A-211ENST00000635893 CAPN14A8MX76 684 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 SCDO00767 359 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 FOXP2O15409 715 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 MAFO75444 373 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-211ENST00000635893 STAT5BP51692 787 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 HIPK4Q8NE63 616 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 CALML6Q8TD86 181 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 TMEM176AQ96HP8 235 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 EXOC2Q96KP1 924 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 GBP4Q96PP9 640 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 MPHOSPH9Q99550 1183 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 AGO3Q9H9G7 860 aaKnown RBP5.09□□□□□ -1.59
SCN1A-211ENST00000635893 PARPBPQ9NWS1 579 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 CEP72Q9P209 647 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 VWA7Q9Y334 891 aa5.09□□□□□ -1.59
SCN1A-211ENST00000635893 MRPS23Q9Y3D9 190 aaKnown RBP5.09□□□□□ -1.59
SCN1A-211ENST00000635893 PRAMEF22A3QJZ6 481 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 DIAPH1O60610 1272 aaKnown RBP5.08□□□□□ -1.6
SCN1A-211ENST00000635893 FAM153BP0C7A2 387 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 KRTAP1-1Q07627 177 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 MAP3K12Q12852 859 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 RIN1Q13671 783 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 NBPF6Q5VWK0 638 aa5.08□□□□□ -1.6
SCN1A-211ENST00000635893 SPTY2D1Q68D10 685 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms