RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MNX1P50219 401 aaPredicted RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 SLC26A2P50443 739 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 DHX8Q14562 1220 aaKnown RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 PLCB4Q15147 1175 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 FMR1NBQ8N0W7 255 aaPredicted RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 ENGASEQ8NFI3 743 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 ATP8B4Q8TF62 1192 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 KAT2BQ92831 832 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 FAM167AQ96KS9 214 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 CCDC43Q96MW1 224 aaKnown RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 MTG1Q9BT17 334 aaPredicted RBP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 RNPEPQ9H4A4 650 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 NRBP2Q9NSY0 501 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 SERTAD1Q9UHV2 236 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 F2P00734 622 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 PSEN2P49810 448 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 MFSD10Q14728 455 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 E2F4Q16254 413 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 KIAA0753Q2KHM9 967 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 CCSAPQ6IQ19 270 aaPredicted RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 RAD54LQ92698 747 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 SH2D3AQ9BRG2 576 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 STK17AQ9UEE5 414 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 STBD1O95210 358 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 EYA4O95677 639 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 PLA2G4BP0C869 781 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 ACLYP53396 1101 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 MCM6Q14566 821 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 XKR9Q5GH70 373 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 ANO5Q75V66 913 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 KCTD17Q8N5Z5 321 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 CEP170P1Q96L14 293 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
LINC00339-208ENST00000634934 KATNAL1Q9BW62 490 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
LINC00339-208ENST00000634934 ARHGEF35A5YM69 484 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
LINC00339-208ENST00000634934 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
LINC00339-208ENST00000634934 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 RGS19P49795 217 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 NPEPPSP55786 919 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 SV2BQ7L1I2 683 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 PPP1R13LQ8WUF5 828 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
LINC00339-208ENST00000634934 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
LINC00339-208ENST00000634934 CUEDC2Q9H467 287 aa16.08■□□□□ 0.16
LINC00339-208ENST00000634934 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.16
LINC00339-208ENST00000634934 DNM1LO00429 736 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 HBP1O60381 514 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 AFMP43652 599 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 RARRES1P49788 294 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 UBE2Q1Q7Z7E8 422 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 STAMQ92783 540 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 NIFKQ9BYG3 293 aaKnown RBP16.07■□□□□ 0.16
LINC00339-208ENST00000634934 CYP26B1Q9NR63 512 aa16.07■□□□□ 0.16
LINC00339-208ENST00000634934 HAS3O00219 553 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 CABYRO75952 493 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 INSRRP14616 1297 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 IGBP1P78318 339 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 PPFIA1Q13136 1202 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 GRAMD1CQ8IYS0 662 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 SYT2Q8N9I0 419 aaPredicted RBP16.06■□□□□ 0.16
LINC00339-208ENST00000634934 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 GLT1D1Q96MS3 346 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 MAGEF1Q9HAY2 307 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
LINC00339-208ENST00000634934 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
LINC00339-208ENST00000634934 PHF24Q9UPV7 400 aa16.06■□□□□ 0.16
LINC00339-208ENST00000634934 MYH9P35579 1960 aaKnown RBP16.06■□□□□ 0.16
LINC00339-208ENST00000634934 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
LINC00339-208ENST00000634934 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 NBPF20Q3BBV1 942 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 FAM47CQ5HY64 1035 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 PADI6Q6TGC4 694 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms