RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 TPH2Q8IWU9 490 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 DNAJB3Q8WWF6 145 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 TUFT1Q9NNX1 390 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 SIP14410 1827 aa16.52■□□□□ 0.23
CDC42BPB-209ENST00000634889 ARID2Q68CP9 1835 aa16.52■□□□□ 0.23
CDC42BPB-209ENST00000634889 MYH15Q9Y2K3 1946 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 M0QZ92 97 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 FGBP02675 491 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 CXCL10P02778 98 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 MUTP22033 750 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 RPA1P27694 616 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 TMOD1P28289 359 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 YWHABP31946 246 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 TBC1D8BQ0IIM8 1120 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 GPNMBQ14956 572 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 SHHQ15465 462 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 TMEM240Q5SV17 173 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 IER5Q5VY09 327 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 DEFB128Q7Z7B8 93 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 EXOC8Q8IYI6 725 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 VWCEQ96DN2 955 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 POLR3CQ9BUI4 534 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 MTIF3Q9H2K0 278 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 CYP26B1Q9NR63 512 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 LRWD1Q9UFC0 647 aa16.51■□□□□ 0.23
CDC42BPB-209ENST00000634889 NBNO60934 754 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 CHRNA1P02708 482 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 CTSHP09668 335 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 ACRP10323 421 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 ACTN1P12814 892 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 MRPS6P82932 125 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 MGAT3Q09327 533 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 MBTPS1Q14703 1052 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 MTERF2Q49AM1 385 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 C9orf50Q5SZB4 431 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 ZNF365Q70YC5 407 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 CATSPER3Q86XQ3 398 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 LINC01465Q8N7H1 131 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 RNPC3Q96LT9 517 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 JPH2Q9BR39 696 aaPredicted RBP16.5■□□□□ 0.23
CDC42BPB-209ENST00000634889 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 IGKV6-21A0A0C4DH24 114 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 TMEM150BA6NC51 233 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 BAIAP3O94812 1187 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 RFC5P40937 340 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 IL17AQ16552 155 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 EFCAB12Q6NXP0 572 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 METTL13Q8N6R0 699 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 MAP7D2Q96T17 732 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 SQORQ9Y6N5 450 aa16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-209ENST00000634889 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 MAFO75444 373 aaPredicted RBP16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 MED24O75448 989 aa16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 CNKSR3Q6P9H4 555 aa16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 USP38Q8NB14 1042 aa16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 AK8Q96MA6 479 aa16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 EVPLQ92817 2033 aa16.48■□□□□ 0.23
CDC42BPB-209ENST00000634889 VWA3AA6NCI4 1184 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 EFCAB14O75071 495 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 F13A1P00488 732 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 DNM2P50570 870 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 CLCN3P51790 818 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 POLGP54098 1239 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 NPEPPSP55786 919 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 PTPAQ15257 358 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 PLEKHG4Q58EX7 1191 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms