RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ATXN2LQ8WWM7 1075 aaKnown RBP12.52□□□□□ -0.41
DDX41-219ENST00000629036 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
DDX41-219ENST00000629036 NECAB3Q96P71 396 aaPredicted RBP12.52□□□□□ -0.41
DDX41-219ENST00000629036 NAP1L4Q99733 375 aaKnown RBP12.52□□□□□ -0.41
DDX41-219ENST00000629036 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
DDX41-219ENST00000629036 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
DDX41-219ENST00000629036 GRXCR1A8MXD5 290 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 NEMFO60524 1076 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 FGBP02675 491 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 OATP04181 439 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 CTSHP09668 335 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 IGBP1P78318 339 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 PLEKHG4Q58EX7 1191 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 MIER3Q7Z3K6 550 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 DNAJB3Q8WWF6 145 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 SNX21Q969T3 373 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
DDX41-219ENST00000629036 ZNF576Q9H609 170 aa12.51□□□□□ -0.41
DDX41-219ENST00000629036 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 PARNO95453 639 aaKnown RBP12.5□□□□□ -0.41
DDX41-219ENST00000629036 KLRC1P26715 233 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
DDX41-219ENST00000629036 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
DDX41-219ENST00000629036 LPIN1Q14693 890 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX41-219ENST00000629036 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 ANO5Q75V66 913 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
DDX41-219ENST00000629036 KIAA0319LQ8IZA0 1049 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 NIFKQ9BYG3 293 aaKnown RBP12.5□□□□□ -0.41
DDX41-219ENST00000629036 PRDM12Q9H4Q4 367 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
DDX41-219ENST00000629036 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 MYH11P35749 1972 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 K7ELQ4 463 aaPredicted RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 BAIAP3O94812 1187 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 ARHGEF15O94989 841 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 MCM7P33993 719 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 PBX2P40425 430 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 WDR5P61964 334 aaKnown RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 DEFB103AP81534 67 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 MRPS6P82932 125 aaKnown RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 DRP2Q13474 957 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 CALCRLQ16602 461 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 CNKSR3Q6P9H4 555 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 SLFN12Q8IYM2 578 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 TMEM40Q8WWA1 233 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 LINC01599Q8WXQ3 324 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 TIFAQ96CG3 184 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 FAM167AQ96KS9 214 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 HSD17B14Q9BPX1 270 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 PBX4Q9BYU1 374 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 RGL1Q9NZL6 768 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 YBX2Q9Y2T7 364 aaKnown RBP12.49□□□□□ -0.41
DDX41-219ENST00000629036 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 CDY2AQ9Y6F7 541 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 XIRP2A4UGR9 3374 aa12.49□□□□□ -0.41
DDX41-219ENST00000629036 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 POTEMA6NI47 508 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 GPR32O75388 356 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 SPATA31C1P0DKV0 1188 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 IGFBP4P22692 258 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 PSMC5P62195 406 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 EPHA7Q15375 998 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 ZNF174Q15697 407 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 IL17AQ16552 155 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 DBF4BQ8NFT6 615 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 LXNQ9BS40 222 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 TTC12Q9H892 705 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
DDX41-219ENST00000629036 TCHHQ07283 1943 aa12.48□□□□□ -0.41
DDX41-219ENST00000629036 ZBTB39O15060 712 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 SLITRK3O94933 977 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 LYPLA2O95372 231 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
DDX41-219ENST00000629036 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 GHRP10912 638 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 QARSP47897 775 aaKnown RBP12.47□□□□□ -0.41
DDX41-219ENST00000629036 CLCN3P51790 818 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 TMEM62Q0P6H9 643 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms