RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 GPIHBP1Q8IV16 184 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 MRPL43Q8N983 215 aaKnown RBP8.34□□□□□ -1.07
TCF4-266ENST00000628689 COLGALT1Q8NBJ5 622 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 HNRNPABQ99729 332 aaKnown RBP8.34□□□□□ -1.07
TCF4-266ENST00000628689 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 MKNK2Q9HBH9 465 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 PUF60Q9UHX1 559 aaKnown RBP8.34□□□□□ -1.07
TCF4-266ENST00000628689 RAB23Q9ULC3 237 aa8.34□□□□□ -1.07
TCF4-266ENST00000628689 APC2O95996 2303 aa8.34□□□□□ -1.08
TCF4-266ENST00000628689 PCNX2A6NKB5 2137 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 C2orf71A6NGG8 1288 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 B4DLN1 442 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 TK2O00142 265 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 N4BP1O75113 896 aaKnown RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 MBD4O95243 580 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 TTLL1O95922 423 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 STAG3L1P0CL83 205 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 MRPL12P52815 198 aaKnown RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 LIMK1P53667 647 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 ATP8B2P98198 1209 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 MGAT3Q09327 533 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 FOXC1Q12948 553 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 HSDL1Q3SXM5 330 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 FBXO47Q5MNV8 452 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 C19orf48Q6RUI8 117 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 EAF2Q96CJ1 260 aaPredicted RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 AGO3Q9H9G7 860 aaKnown RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 TYW1Q9NV66 732 aaKnown RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 SETD4Q9NVD3 440 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 MTF2Q9Y483 593 aaPredicted RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 SUPT16HQ9Y5B9 1047 aaKnown RBP8.33□□□□□ -1.08
TCF4-266ENST00000628689 LOXHD1Q8IVV2 1947 aa8.33□□□□□ -1.08
TCF4-266ENST00000628689 CACNA1EQ15878 2313 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 SPAG17Q6Q759 2223 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 H3BRB1 525 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 EPCAMP16422 314 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 PRSS12P56730 875 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 ADAM17P78536 824 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 NONOQ15233 471 aaKnown RBP eCLIP8.32□□□□□ -1.08
TCF4-266ENST00000628689 PTPN14Q15678 1187 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 GPR149Q86SP6 731 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 CELF5Q8N6W0 485 aaKnown RBP8.32□□□□□ -1.08
TCF4-266ENST00000628689 LSM14BQ9BX40 385 aaKnown RBP8.32□□□□□ -1.08
TCF4-266ENST00000628689 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
TCF4-266ENST00000628689 TUT1Q9H6E5 874 aaKnown RBP8.32□□□□□ -1.08
TCF4-266ENST00000628689 URB1O60287 2271 aaKnown RBP8.32□□□□□ -1.08
TCF4-266ENST00000628689 TENM4Q6N022 2769 aa8.32□□□□□ -1.08
TCF4-266ENST00000628689 GREB1Q4ZG55 1949 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 KANSL1LA0AUZ9 987 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 TBKBP1A7MCY6 615 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 SORBS3O60504 671 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 SCG2P13521 617 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 CD52P31358 61 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 LARP1BQ659C4 914 aaKnown RBP8.31□□□□□ -1.08
TCF4-266ENST00000628689 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 MYL10Q9BUA6 226 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 FAM126AQ9BYI3 521 aaPredicted RBP8.31□□□□□ -1.08
TCF4-266ENST00000628689 CWH43Q9H720 699 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 GPSM3Q9Y4H4 160 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 SPTAN1Q13813 2472 aaKnown RBP8.31□□□□□ -1.08
TCF4-266ENST00000628689 PIEZO2Q9H5I5 2752 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
TCF4-266ENST00000628689 FAM170BA6NMN3 283 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 EIF4E1BA6NMX2 242 aaKnown RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 GIPC1O14908 333 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 PRDM1O75626 825 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 GNAT1P11488 350 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 IBSPP21815 317 aaPredicted RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 SLC16A2P36021 539 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 RARSP54136 660 aaKnown RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 SMC1AQ14683 1233 aaKnown RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 STXBP2Q15833 593 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 LETM2Q2VYF4 491 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 FAM102BQ5T8I3 360 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 TTBK2Q6IQ55 1244 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 ZNF444Q8N0Y2 327 aaPredicted RBP8.3□□□□□ -1.08
TCF4-266ENST00000628689 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 SLC22A17Q8WUG5 538 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 TBC1D5Q92609 795 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 SHDQ96IW2 340 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 SPATA33Q96N06 139 aa8.3□□□□□ -1.08
TCF4-266ENST00000628689 TAAR1Q96RJ0 339 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms