RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 TMOD1P28289 359 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 ZNF174Q15697 407 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 ZNF697Q5TEC3 545 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
UBE3D-208ENST00000626828 NCAPH2Q6IBW4 605 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 USP38Q8NB14 1042 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 APBB2Q92870 758 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 PBX4Q9BYU1 374 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 CELF4Q9BZC1 486 aaKnown RBP18.8■□□□□ 0.6
UBE3D-208ENST00000626828 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 WNT7AO00755 349 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 STBD1O95210 358 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 C22orf31O95567 290 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 DNAJB2P25686 324 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 WDR5P61964 334 aaKnown RBP18.79■□□□□ 0.6
UBE3D-208ENST00000626828 SPIRE1Q08AE8 756 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 TARBP2Q15633 366 aaKnown RBP18.79■□□□□ 0.6
UBE3D-208ENST00000626828 FBXO47Q5MNV8 452 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 TTC38Q5R3I4 469 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 MCTP1Q6DN14 999 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 FAM43BQ6ZT52 329 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-208ENST00000626828 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 BANK1Q8NDB2 785 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 TRPV2Q9Y5S1 764 aa18.79■□□□□ 0.6
UBE3D-208ENST00000626828 KDM3AQ9Y4C1 1321 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 GHRP10912 638 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 TBC1D8BQ0IIM8 1120 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 LPIN1Q14693 890 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 TCTN1Q2MV58 587 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 Q7L0L9 218 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 OTUD6AQ7L8S5 288 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 C4orf19Q8IY42 314 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 IFIH1Q9BYX4 1025 aaKnown RBP18.78■□□□□ 0.6
UBE3D-208ENST00000626828 OSBPL7Q9BZF2 842 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 MTMR10Q9NXD2 777 aa18.78■□□□□ 0.6
UBE3D-208ENST00000626828 SLITRK3O94933 977 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 PBX2P40425 430 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 TMEM62Q0P6H9 643 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 TSHZ1Q6ZSZ6 1077 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 HERC6Q8IVU3 1022 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 TPH2Q8IWU9 490 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 EXOC8Q8IYI6 725 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 DYDC2Q96IM9 177 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 HSD17B14Q9BPX1 270 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 EIF2AK1Q9BQI3 630 aaKnown RBP18.77■□□□□ 0.6
UBE3D-208ENST00000626828 SUGCTQ9HAC7 445 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 RGL1Q9NZL6 768 aa18.77■□□□□ 0.6
UBE3D-208ENST00000626828 SEPT9Q9UHD8 586 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-208ENST00000626828 LAMA2P24043 3122 aaKnown RBP18.77■□□□□ 0.6
UBE3D-208ENST00000626828 AMHP03971 560 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 PDCP20941 246 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 DNM2P50570 870 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 TOB1P50616 345 aaPredicted RBP18.76■□□□□ 0.59
UBE3D-208ENST00000626828 RABGGTBP53611 331 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 CDC42EP1Q00587 391 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 MTERF2Q49AM1 385 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 ODR4Q5SWX8 454 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 ANO5Q75V66 913 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 INTS4Q96HW7 963 aaKnown RBP18.76■□□□□ 0.59
UBE3D-208ENST00000626828 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
UBE3D-208ENST00000626828 ZBED2Q9BTP6 218 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 ZNF576Q9H609 170 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 SLC28A3Q9HAS3 691 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 PPME1Q9Y570 386 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 SZT2Q5T011 3432 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 LOXHD1Q8IVV2 1947 aa18.76■□□□□ 0.59
UBE3D-208ENST00000626828 OR52Z1P0C646 297 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 CRYBB1P53674 252 aaPredicted RBP18.75■□□□□ 0.59
UBE3D-208ENST00000626828 CTTNQ14247 550 aaKnown RBP18.75■□□□□ 0.59
UBE3D-208ENST00000626828 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 LINC01465Q8N7H1 131 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 C4orf32Q8N8J7 132 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 SNX21Q969T3 373 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 FAM161BQ96MY7 647 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 CEP89Q96ST8 783 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 LXNQ9BS40 222 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
UBE3D-208ENST00000626828 AGO3Q9H9G7 860 aaKnown RBP18.75■□□□□ 0.59
UBE3D-208ENST00000626828 AKT3Q9Y243 479 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 GINS2Q9Y248 185 aa18.75■□□□□ 0.59
UBE3D-208ENST00000626828 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 ENPP3O14638 875 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 MAFO75444 373 aaPredicted RBP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 LYPLA2O95372 231 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 TECP42680 631 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 CLCN3P51790 818 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 DEFB103AP81534 67 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 PDIA5Q14554 519 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms