RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 CELF4Q9BZC1 486 aaKnown RBP25.18■■□□□ 1.62
SF1-220ENST00000626028 OATP04181 439 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 MYOGP15173 224 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 LPIN1Q14693 890 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 FTHL17Q9BXU8 183 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 INSL6Q9Y581 213 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 RALGAPA2Q2PPJ7 1873 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 EYSQ5T1H1 3165 aa25.17■■□□□ 1.62
SF1-220ENST00000626028 BTBD18B2RXH4 712 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 CHMP2AO43633 222 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 ZNF862O60290 1169 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 DKC1O60832 514 aaKnown RBP eCLIP25.16■■□□□ 1.62
SF1-220ENST00000626028 BAG4O95429 457 aaKnown RBP25.16■■□□□ 1.62
SF1-220ENST00000626028 C22orf31O95567 290 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 GHRP10912 638 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 PRKCEQ02156 737 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 ODR4Q5SWX8 454 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 NLRC5Q86WI3 1866 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 KIAA0319LQ8IZA0 1049 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 TOP1MTQ969P6 601 aa25.16■■□□□ 1.62
SF1-220ENST00000626028 TMOD1P28289 359 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 MCM2P49736 904 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 HTRA4P83105 476 aaPredicted RBP25.15■■□□□ 1.62
SF1-220ENST00000626028 XKR3Q5GH77 459 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 EARS2Q5JPH6 523 aaKnown RBP25.15■■□□□ 1.62
SF1-220ENST00000626028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.15■■□□□ 1.625e-14■■□□□ 13
SF1-220ENST00000626028 C8orf76Q96K31 380 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 NIFKQ9BYG3 293 aaKnown RBP25.15■■□□□ 1.62
SF1-220ENST00000626028 OSBPL7Q9BZF2 842 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 VAV3Q9UKW4 847 aa25.15■■□□□ 1.62
SF1-220ENST00000626028 DTNBO60941 627 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 TAP1Q03518 808 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 MYOCDQ8IZQ8 938 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 FBXO18Q8NFZ0 1043 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 MAFAQ8NHW3 353 aaPredicted RBP25.14■■□□□ 1.62
SF1-220ENST00000626028 HAS1Q92839 578 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 GJA10Q969M2 543 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 ZBTB10Q96DT7 871 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 TBC1D32Q96NH3 1257 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 FOXP1Q9H334 677 aaPredicted RBP25.14■■□□□ 1.62
SF1-220ENST00000626028 PRDM12Q9H4Q4 367 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 KIF3AQ9Y496 699 aa25.14■■□□□ 1.62
SF1-220ENST00000626028 PRUNE2Q8WUY3 3088 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.13■■□□□ 1.61
SF1-220ENST00000626028 MARCH6O60337 910 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 PSMC5P62195 406 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 ORC2Q13416 577 aaPredicted RBP25.13■■□□□ 1.61
SF1-220ENST00000626028 FAM184AQ8NB25 1140 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 PPME1Q9Y570 386 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 ARID2Q68CP9 1835 aa25.13■■□□□ 1.61
SF1-220ENST00000626028 CDC42EP1Q00587 391 aa25.12■■□□□ 1.61
SF1-220ENST00000626028 TARBP2Q15633 366 aaKnown RBP25.12■■□□□ 1.61
SF1-220ENST00000626028 UGCGQ16739 394 aa25.12■■□□□ 1.61
SF1-220ENST00000626028 LINC01465Q8N7H1 131 aa25.12■■□□□ 1.61
SF1-220ENST00000626028 P4HBP07237 508 aaKnown RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 POU3F3P20264 500 aaPredicted RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 QARSP47897 775 aaKnown RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 CRYBB1P53674 252 aaPredicted RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 TBC1D8BQ0IIM8 1120 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 PAK2Q13177 524 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 EFCAB12Q6NXP0 572 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 POTEDQ86YR6 584 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 EXOC8Q8IYI6 725 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 METTL13Q8N6R0 699 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 SP7Q8TDD2 431 aaPredicted RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 MAP7D2Q96T17 732 aa25.11■■□□□ 1.61
SF1-220ENST00000626028 AGO3Q9H9G7 860 aaKnown RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 RNF216Q9NWF9 866 aaPredicted RBP25.11■■□□□ 1.61
SF1-220ENST00000626028 FAM205CA6NFA0 338 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 ENPP3O14638 875 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 NEMFO60524 1076 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 TMEM62Q0P6H9 643 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 EPHA7Q15375 998 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 JPH2Q9BR39 696 aaPredicted RBP25.1■■□□□ 1.61
SF1-220ENST00000626028 PADI3Q9ULW8 664 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 PCDHA12Q9UN75 941 aa25.1■■□□□ 1.61
SF1-220ENST00000626028 EML1O00423 815 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 GPR182O15218 404 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 STBD1O95210 358 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 CD52P31358 61 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 SPIRE1Q08AE8 756 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 CALCRLQ16602 461 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 TMCO2Q7Z6W1 182 aaPredicted RBP25.09■■□□□ 1.61
SF1-220ENST00000626028 SAMD11Q96NU1 681 aa25.09■■□□□ 1.61
SF1-220ENST00000626028 TGS1Q96RS0 853 aaKnown RBP25.09■■□□□ 1.61
SF1-220ENST00000626028 TSPYL2Q9H2G4 693 aaPredicted RBP25.09■■□□□ 1.61
SF1-220ENST00000626028 COL4A4P53420 1690 aaPredicted RBP25.09■■□□□ 1.61
SF1-220ENST00000626028 LINC01553A4QN01 128 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 TRAPPC10P48553 1259 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 ERVK-21P61565 698 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 TRMT1LQ7Z2T5 733 aaKnown RBP25.08■■□□□ 1.61
SF1-220ENST00000626028 C4orf19Q8IY42 314 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 SLC17A8Q8NDX2 589 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 YME1L1Q96TA2 773 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 SEPT9Q9UHD8 586 aaPredicted RBP25.08■■□□□ 1.61
SF1-220ENST00000626028 UNC80Q8N2C7 3258 aa25.08■■□□□ 1.61
SF1-220ENST00000626028 PRRC2BQ5JSZ5 2229 aaKnown RBP25.07■■□□□ 1.6
SF1-220ENST00000626028 LCHNA4D1U4 455 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 GPR32O75388 356 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 RPS6KA5O75582 802 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms