RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 HSPBP1Q9NZL4 362 aa3.73□□□□□ -1.81
SCARNA4-202ENST00000625402 TMPRSS11EQ9UL52 423 aa3.73□□□□□ -1.81
SCARNA4-202ENST00000625402 EDARQ9UNE0 448 aa3.73□□□□□ -1.81
SCARNA4-202ENST00000625402 NOC2LQ9Y3T9 749 aaKnown RBP3.73□□□□□ -1.81
SCARNA4-202ENST00000625402 WASHC2AQ641Q2 1341 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 GOLGA8AA7E2F4 631 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 GOLGA8BA8MQT2 603 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 IL18BPO95998 194 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 LPLP06858 475 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 OSMP13725 252 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 ENPP1P22413 925 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 ITGA1P56199 1179 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 IL13RA1P78552 427 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 HTRA3P83110 453 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 SRSF3P84103 164 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 SRSF2Q01130 221 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PFKPQ01813 784 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 CACNB2Q08289 660 aaPredicted RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 ADAM9Q13443 819 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 TRIM25Q14258 630 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PPP2R5AQ15172 486 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 SKIDA1Q1XH10 827 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PITRM1Q5JRX3 1037 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PRAMEF9Q5VWM5 478 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 CCDC62Q6P9F0 684 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 CD300LDQ6UXZ3 194 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 FRMD7Q6ZUT3 714 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 KANSL1Q7Z3B3 1105 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 STK32CQ86UX6 486 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PHYKPLQ8IUZ5 450 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 SMARCC2Q8TAQ2 1214 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 DDX11Q96FC9 970 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 FOXB1Q99853 325 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 GORASP1Q9BQQ3 440 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 SGPP1Q9BX95 441 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 ANO3Q9BYT9 981 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 RNF38Q9H0F5 515 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 QRSL1Q9H0R6 528 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 NSUN3Q9H649 340 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 GCM1Q9NP62 436 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 USP36Q9P275 1121 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 ARHGAP28Q9P2N2 729 aa3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 LUC7L2Q9Y383 392 aaKnown RBP3.72□□□□□ -1.81
SCARNA4-202ENST00000625402 PRSS38A1L453 326 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 BIN1O00499 593 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 ABLIM1O14639 778 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 PRPF6O94906 941 aaKnown RBP3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 LIMS1P48059 325 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 MTNR1BP49286 362 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TMEM62Q0P6H9 643 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 FAPQ12884 760 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 NOLC1Q14978 699 aaKnown RBP eCLIP3.71□□□□□ -1.82not detected■□□□□ 9.1
SCARNA4-202ENST00000625402 FSCN1Q16658 493 aaKnown RBP3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TOR2AQ5JU69 321 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TTC38Q5R3I4 469 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TMEM240Q5SV17 173 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 XP32Q5T750 250 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 KANK2Q63ZY3 851 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 SLFN12LQ6IEE8 588 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 KIAA1841Q6NSI8 718 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 PGM2L1Q6PCE3 622 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 MPZL3Q6UWV2 235 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 ESPNLQ6ZVH7 1005 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 KCNK18Q7Z418 384 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 B3GNT8Q7Z7M8 397 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 LDHDQ86WU2 507 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 SLC41A1Q8IVJ1 513 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 CMTR2Q8IYT2 770 aaKnown RBP3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TSPEARQ8WU66 669 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 JADE3Q92613 823 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 EAF2Q96CJ1 260 aaPredicted RBP3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 FAXDC2Q96IV6 333 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 MAML3Q96JK9 1138 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TEKT5Q96M29 485 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 ACAP3Q96P50 834 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 NOX5Q96PH1 765 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 TUBGCP5Q96RT8 1024 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 EPB41L4BQ9H329 900 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 KCTD10Q9H3F6 313 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 INCENPQ9NQS7 918 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 ZNF277Q9NRM2 450 aaPredicted RBP3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 IP6K2Q9UHH9 426 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 ZNF180Q9UJW8 692 aa3.71□□□□□ -1.82
SCARNA4-202ENST00000625402 XPOTO43592 962 aaKnown RBP3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 APOL3O95236 402 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 PLA2G1BP04054 148 aaKnown RBP3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 PFKMP08237 780 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 CYP2C8P10632 490 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 NCAM1P13591 858 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 AGXTP21549 392 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 C5AR1P21730 350 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 NKX3-2P78367 333 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 KRT85P78386 507 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 ADCY1Q08828 1119 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 MLANAQ16655 118 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 OLFML2BQ68BL8 750 aa3.7□□□□□ -1.82
SCARNA4-202ENST00000625402 VASNQ6EMK4 673 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms