RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 GBP6Q6ZN66 633 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 MIGA2Q7L4E1 593 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 IRF2BP2Q7Z5L9 587 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM83AQ86UY5 434 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 LDHDQ86WU2 507 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLC35C1Q96A29 364 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZNF577Q9BSK1 485 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 TMEM39BQ9GZU3 492 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZNF277Q9NRM2 450 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SEL1LQ9UBV2 794 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 FBXL5Q9UKA1 691 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 KIF13BQ9NQT8 1826 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 UBE4BO95155 1302 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZMYM2Q9UBW7 1377 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 SHTN1A0MZ66 631 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PALMO75781 387 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZMYND10O75800 440 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 KLRC1P26715 233 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 CXCR5P32302 372 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 TNNT3P45378 269 aaPredicted RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ENOX2Q16206 610 aaKnown RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 KIAA0753Q2KHM9 967 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM71BQ8TC56 605 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PSMB7Q99436 277 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 UNC45AQ9H3U1 944 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 MED4Q9NPJ6 270 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 KCND2Q9NZV8 630 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 RNF14Q9UBS8 474 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PCDHGC5Q9Y5F6 944 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 MYH10P35580 1976 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ERICH4A6NGS2 130 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 BTNL10A8MVZ5 291 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZBTB39O15060 712 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZBTB7AO95365 584 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ARP10275 920 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 POLD1P28340 1107 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PSMC2P35998 433 aaKnown RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZNF131P52739 623 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PTK2Q05397 1052 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 CFAP221Q4G0U5 840 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 DEFB129Q9H1M3 183 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 VPS33BQ9H267 617 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PSD3Q9NYI0 1048 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 VPS18Q9P253 973 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ADAM21Q9UKJ8 722 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 ODF2LQ9ULJ1 636 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 RBBP6Q7Z6E9 1792 aaKnown RBP9.11□□□□□ -0.95
SND1-IT1-201ENST00000623342 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 IPO5O00410 1097 aaKnown RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 N4BP1O75113 896 aaKnown RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ASNSP08243 561 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 KCNA3P22001 575 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ANXA13P27216 316 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 PRKCIP41743 596 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 GYS2P54840 703 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZC2HC1CQ53FD0 456 aaPredicted RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 B3GNT9Q6UX72 402 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZNF720Q7Z2F6 126 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM186BQ8IYM0 893 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 AGBL3Q8NEM8 1001 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 RIT2Q99578 217 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 LRRC1Q9BTT6 524 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 PACSIN1Q9BY11 444 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 GLIS2Q9BZE0 524 aaPredicted RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 SIX2Q9NPC8 291 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 A0A0U1RQG5 324 aaPredicted RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ICAM1P05362 532 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MYBL2P10244 700 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 PTGER2P43116 358 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MATR3P43243 847 aaKnown RBP eCLIP9.1□□□□□ -0.953e-8■□□□□ 9.3
SND1-IT1-201ENST00000623342 AARSP49588 968 aaKnown RBP eCLIP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 HSD17B4P51659 736 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 JAM2P57087 298 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 MEI1Q5TIA1 1274 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 HS2ST1Q7LGA3 356 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM178BQ8IXR5 827 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 RBM46Q8TBY0 533 aaKnown RBP9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 NEK9Q8TD19 979 aa9.1□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms