RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 KIAA0319LQ8IZA0 1049 aa27.06■■□□□ 1.92
CPSF1-214ENST00000622776 ERVK-5Q9HDB9 667 aa27.06■■□□□ 1.92
CPSF1-214ENST00000622776 FAM86B1E9PN63 330 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 FAM86B2P0C5J1 330 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 IBSPP21815 317 aaPredicted RBP27.05■■□□□ 1.92
CPSF1-214ENST00000622776 SARSP49591 514 aaKnown RBP27.05■■□□□ 1.92
CPSF1-214ENST00000622776 JAKMIP3Q5VZ66 844 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 PDXDC2PQ6P474 469 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 FAM43BQ6ZT52 329 aaPredicted RBP27.05■■□□□ 1.92
CPSF1-214ENST00000622776 POF1BQ8WVV4 589 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 POP1Q99575 1024 aaKnown RBP27.05■■□□□ 1.92
CPSF1-214ENST00000622776 CDHR5Q9HBB8 845 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 ZNF302Q9NR11 478 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 NOC2LQ9Y3T9 749 aaKnown RBP27.05■■□□□ 1.92
CPSF1-214ENST00000622776 EVPLQ92817 2033 aa27.05■■□□□ 1.92
CPSF1-214ENST00000622776 KIAA1671Q9BY89 1806 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 DHX15O43143 795 aaKnown RBP27.04■■□□□ 1.92
CPSF1-214ENST00000622776 MGEA5O60502 916 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 RPS6KA5O75582 802 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 NDUFV1P49821 464 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 ZNF484Q5JVG2 852 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 MIS18BP1Q6P0N0 1132 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 ADGRD2Q7Z7M1 963 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 PCDHB7Q9Y5E2 793 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 COL1A2P08123 1366 aa27.04■■□□□ 1.92
CPSF1-214ENST00000622776 IGLV3-22A0A075B6J6 115 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 RCAN1P53805 252 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 SWSAP1Q6NVH7 229 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 EFHBQ8N7U6 833 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 TMEM40Q8WWA1 233 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 CRYGNQ8WXF5 182 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 MSLNLQ96KJ4 702 aa27.03■■□□□ 1.92
CPSF1-214ENST00000622776 ZBTB42B2RXF5 422 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 IPO5O00410 1097 aaKnown RBP27.02■■□□□ 1.92
CPSF1-214ENST00000622776 CYP3A4P08684 503 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 ATP4AP20648 1035 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 KRT32Q14532 448 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 PFKFB3Q16875 520 aaPredicted RBP27.02■■□□□ 1.92
CPSF1-214ENST00000622776 ODR4Q5SWX8 454 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 SKAP1Q86WV1 359 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 ADAM2Q99965 735 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 NAP1L2Q9ULW6 460 aaPredicted RBP27.02■■□□□ 1.92
CPSF1-214ENST00000622776 ST3GAL5Q9UNP4 418 aa27.02■■□□□ 1.92
CPSF1-214ENST00000622776 EYA4O95677 639 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 ADD1P35611 737 aaKnown RBP27.01■■□□□ 1.91
CPSF1-214ENST00000622776 RGS18Q9NS28 235 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 C1orf112Q9NSG2 853 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 RNF216Q9NWF9 866 aaPredicted RBP27.01■■□□□ 1.91
CPSF1-214ENST00000622776 CLEC1BQ9P126 229 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 TRIOO75962 3097 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 ZNF318Q5VUA4 2279 aa27.01■■□□□ 1.91
CPSF1-214ENST00000622776 DENND3A2RUS2 1198 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 GPR182O15218 404 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 PPFIA3O75145 1194 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 NRIP1P48552 1158 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 SLC24A5Q71RS6 500 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 RBM23Q86U06 439 aaKnown RBP27■■□□□ 1.91
CPSF1-214ENST00000622776 CKAP2LQ8IYA6 745 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 ZNF577Q9BSK1 485 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 TBC1D22BQ9NU19 505 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 MUTYHQ9UIF7 546 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 PCDHB12Q9Y5F1 795 aa27■■□□□ 1.91
CPSF1-214ENST00000622776 TECTAO75443 2155 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 ESYT2A0FGR8 921 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 TBKBP1A7MCY6 615 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 C9IYK1 514 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 ADAMTS3O15072 1205 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 C22orf31O95567 290 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 HMGB1P09429 215 aaKnown RBP26.99■■□□□ 1.91
CPSF1-214ENST00000622776 KIZQ2M2Z5 673 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 HERC4Q5GLZ8 1057 aaPredicted RBP26.99■■□□□ 1.91
CPSF1-214ENST00000622776 SPOUT1Q5T280 376 aaKnown RBP26.99■■□□□ 1.91
CPSF1-214ENST00000622776 FAM102BQ5T8I3 360 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 MCTP2Q6DN12 878 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 RNF135Q8IUD6 432 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 BBXQ8WY36 941 aaPredicted RBP26.99■■□□□ 1.91
CPSF1-214ENST00000622776 PPP1R16BQ96T49 567 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 ZMYND12Q9H0C1 365 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 PCDHGC5Q9Y5F6 944 aa26.99■■□□□ 1.91
CPSF1-214ENST00000622776 MAFBQ9Y5Q3 323 aaPredicted RBP26.99■■□□□ 1.91
CPSF1-214ENST00000622776 MYH9P35579 1960 aaKnown RBP26.98■■□□□ 1.91
CPSF1-214ENST00000622776 CCDC196A0A1B0GTZ2 297 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 METAP2P50579 478 aaKnown RBP eCLIP26.98■■□□□ 1.916e-8■■■□□ 18.7
CPSF1-214ENST00000622776 CRYBB1P53674 252 aaPredicted RBP26.98■■□□□ 1.91
CPSF1-214ENST00000622776 FGD1P98174 961 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 UBE3AQ05086 875 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 COASYQ13057 564 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 ZNF746Q6NUN9 644 aaPredicted RBP26.98■■□□□ 1.91
CPSF1-214ENST00000622776 SMRP1Q8NCR6 262 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 OSMRQ99650 979 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 C6orf50Q9HD87 102 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 AAASQ9NRG9 546 aa26.98■■□□□ 1.91
CPSF1-214ENST00000622776 SETQ01105 290 aaPredicted RBP26.97■■□□□ 1.91
CPSF1-214ENST00000622776 TRMT1LQ7Z2T5 733 aaKnown RBP26.97■■□□□ 1.91
CPSF1-214ENST00000622776 FAM228AQ86W67 206 aa26.97■■□□□ 1.91
CPSF1-214ENST00000622776 REXO1Q8N1G1 1221 aaKnown RBP26.97■■□□□ 1.91
CPSF1-214ENST00000622776 METTL13Q8N6R0 699 aa26.97■■□□□ 1.91
CPSF1-214ENST00000622776 MICAL1Q8TDZ2 1067 aa26.97■■□□□ 1.91
CPSF1-214ENST00000622776 TLE6Q9H808 572 aa26.97■■□□□ 1.91
CPSF1-214ENST00000622776 FNDC1Q4ZHG4 1894 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms