RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
LINC00963-214ENST00000622680 ERVK-5Q9HDB9 667 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 RIC8AQ9NPQ8 531 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 NOC2LQ9Y3T9 749 aaKnown RBP12.5□□□□□ -0.41
LINC00963-214ENST00000622680 USP15Q9Y4E8 981 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-214ENST00000622680 SQORQ9Y6N5 450 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 DOCK6Q96HP0 2047 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 DMDP11532 3685 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
LINC00963-214ENST00000622680 FAM186AA6NE01 2351 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 BACH1O14867 736 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 KLRC1P26715 233 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
LINC00963-214ENST00000622680 ADCY7P51828 1080 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 CEP55Q53EZ4 464 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 NAALADL2Q58DX5 795 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
LINC00963-214ENST00000622680 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 SGMS1Q86VZ5 419 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 VN1R2Q8NFZ6 395 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 ADAM2Q99965 735 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
LINC00963-214ENST00000622680 DENND3A2RUS2 1198 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 ZBTB42B2RXF5 422 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 PER2O15055 1255 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 SREBF1P36956 1147 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 FUT2Q10981 343 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 COASYQ13057 564 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 NECTIN1Q15223 517 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 TRMT1LQ7Z2T5 733 aaKnown RBP12.48□□□□□ -0.41
LINC00963-214ENST00000622680 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 OSMRQ99650 979 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 TLE6Q9H808 572 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 TLR9Q9NR96 1032 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
LINC00963-214ENST00000622680 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 COL1A2P08123 1366 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 TMEM221A6NGB7 291 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 LOC730098B7Z3J9 87 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 M0R296 226 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 MEIS1O00470 390 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ADAMTS3O15072 1205 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FGF18O76093 207 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ATG7O95352 703 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 VTNP04004 478 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FGFR1P11362 822 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 APOBRQ0VD83 1088 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 RTN1Q16799 776 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 KIZQ2M2Z5 673 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 SKAP1Q86WV1 359 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 THNSL1Q8IYQ7 743 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 COLGALT1Q8NBJ5 622 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 MICAL1Q8TDZ2 1067 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ATP8B4Q8TF62 1192 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 EDAQ92838 391 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 MFSD14AQ96MC6 490 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ZNF302Q9NR11 478 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
LINC00963-214ENST00000622680 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 GOLGA8BA8MQT2 603 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 C9IYK1 514 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 DHX15O43143 795 aaKnown RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 ZBTB43O43298 467 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 HBP1O60381 514 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 C22orf31O95567 290 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 FOSP01100 380 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 ATP4AP20648 1035 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 SP100P23497 879 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 CDC27P30260 824 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 ZNF76P36508 570 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 PBX3P40426 434 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 ERVFC1P60507 584 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 AP3B2Q13367 1082 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 IER5LQ5T953 404 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 PDXDC2PQ6P474 469 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 SYNE3Q6ZMZ3 975 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 TRIM67Q6ZTA4 783 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 PLA2G4DQ86XP0 818 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 NME8Q8N427 588 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms