RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 TMEM110-MUSTN1A8MSY1 372 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 FSBPO95073 299 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 SHBGP04278 402 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 MAP2K2P36507 400 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 USP8P40818 1118 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-211ENST00000622020 ARHGAP44Q17R89 818 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 ZC2HC1CQ53FD0 456 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-211ENST00000622020 SELENOSQ9BQE4 189 aa17.18■□□□□ 0.34
NPHP4-211ENST00000622020 BUB1BO60566 1050 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-211ENST00000622020 TTLL1O95922 423 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 SLCO1A2P46721 670 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 PPP2R2AP63151 447 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 TCP10Q12799 353 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 GIT2Q14161 759 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 KNOP1Q1ED39 458 aaKnown RBP17.17■□□□□ 0.34
NPHP4-211ENST00000622020 NBPF9Q3BBW0 867 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
NPHP4-211ENST00000622020 CCDC91Q7Z6B0 441 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 TEX2Q8IWB9 1127 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 PBKQ96KB5 322 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 CCDC113Q9H0I3 377 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 SLC40A1Q9NP59 571 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 SLC12A6Q9UHW9 1150 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 DAGLAQ9Y4D2 1042 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 OPLAHO14841 1288 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 CHMP2AO43633 222 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 LRRN2O75325 713 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-211ENST00000622020 SLC12A3P55017 1021 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 PLTPP55058 493 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 CUL1Q13616 776 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 COG2Q14746 738 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 E2F5Q15329 346 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 ARFGAP2Q8N6H7 521 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 SEC16BQ96JE7 1060 aa17.17■□□□□ 0.34
NPHP4-211ENST00000622020 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
NPHP4-211ENST00000622020 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 ZBTB5O15062 677 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 CAND2O75155 1236 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 CDR1P51861 262 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 QRICH1Q2TAL8 776 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 TMC3Q7Z5M5 1100 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 ACTRT1Q8TDG2 376 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 GGT7Q9UJ14 662 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 SNX24Q9Y343 169 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 UTP11Q9Y3A2 253 aaKnown RBP17.16■□□□□ 0.34
NPHP4-211ENST00000622020 NR3C1P04150 777 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 KRT13P13646 458 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 SLC35G2Q8TBE7 412 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 ANO3Q9BYT9 981 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 ERVK-5Q9HDB9 667 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 TAS2R14Q9NYV8 317 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-211ENST00000622020 KDM3AQ9Y4C1 1321 aa17.16■□□□□ 0.34
NPHP4-211ENST00000622020 TRAPPC3O43617 180 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 EVI5O60447 810 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 RPS6KA4O75676 772 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 NMT1P30419 496 aaKnown RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 NT5DC3Q86UY8 548 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 EP400Q96L91 3159 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 ORC2Q13416 577 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 CDCA7Q9BWT1 371 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 IFNAR2P48551 515 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 VPS36Q86VN1 386 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 CCDC26Q8TAB7 109 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 LNX1Q8TBB1 728 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-211ENST00000622020 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 AMFRQ9UKV5 643 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 RREB1Q92766 1687 aa17.15■□□□□ 0.34
NPHP4-211ENST00000622020 HGSO14964 777 aaPredicted RBP17.14■□□□□ 0.33
NPHP4-211ENST00000622020 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 CYP2J2P51589 502 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
NPHP4-211ENST00000622020 EPHA7Q15375 998 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 SWT1Q5T5J6 900 aaKnown RBP17.14■□□□□ 0.33
NPHP4-211ENST00000622020 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
NPHP4-211ENST00000622020 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 ARHGEF26Q96DR7 871 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms