RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 CLEC4DQ8WXI8 215 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 JAKMIP2Q96AA8 810 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 LSM14BQ9BX40 385 aaKnown RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 PHACTR2O75167 634 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 FAM13AO94988 1023 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 ZNF280AP59817 542 aaPredicted RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 ANGEL2Q5VTE6 544 aaKnown RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 NLGN2Q8NFZ4 835 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 KAT2BQ92831 832 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 NAPGQ99747 312 aaPredicted RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 PCDHB13Q9Y5F0 798 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 LXNQ9BS40 222 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 MAP2K7O14733 419 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 WDR46O15213 610 aaKnown RBP21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 AKR1B10O60218 316 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 SRGAP2O75044 1071 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 ACTN1P12814 892 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 RPS6P62753 249 aaKnown RBP21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 KCNH2Q12809 1159 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 TDRD12Q587J7 1177 aaKnown RBP21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 TRIM59Q8IWR1 403 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 WRNIP1Q96S55 665 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 MXRA8Q9BRK3 442 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 EHMT1Q9H9B1 1298 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 RIPK3Q9Y572 518 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 ZNF541Q9H0D2 1346 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 TMEM150BA6NC51 233 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 KRT83P78385 493 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 PPP2R5CQ13362 524 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 HAUS4Q9H6D7 363 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 CDC23Q9UJX2 597 aa21.24■□□□□ 0.99
LAPTM4B-204ENST00000619747 A0A1W2PQJ5 194 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 CTNND1O60716 968 aaKnown RBP21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 PLA2G6O60733 806 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 COG2Q14746 738 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 FIGNQ5HY92 759 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 BAP1Q92560 729 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 ATG4CQ96DT6 458 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 CEP63Q96MT8 703 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 TEKT3Q9BXF9 490 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 KIAA1683Q9H0B3 1180 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 AKAP3O75969 853 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 NOL4O94818 638 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 MRPS9P82933 396 aaKnown RBP21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 SPA17Q15506 151 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 C1orf186Q6ZWK4 172 aa21.23■□□□□ 0.99
LAPTM4B-204ENST00000619747 HSD17B4P51659 736 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 KIF11P52732 1056 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 HMGCS2P54868 508 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 GFPT1Q06210 699 aaPredicted RBP21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 ZHX2Q9Y6X8 837 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 CHMP4BP1P59074 171 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 PPP2R5AQ15172 486 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 TRPM4Q8TD43 1214 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 SYTL5Q8TDW5 730 aaPredicted RBP21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 TUFT1Q9NNX1 390 aa21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 ARMCX3Q9UH62 379 aaPredicted RBP21.22■□□□□ 0.99
LAPTM4B-204ENST00000619747 A0A087WUV0 522 aaPredicted RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 FAM170AA1A519 330 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 KRT86O43790 486 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 ATP1A1P05023 1023 aaKnown RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 SLC9A1P19634 815 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 EPM2AIP1Q7L775 607 aaPredicted RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 LPAR1Q92633 364 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 CAPZA3Q96KX2 299 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 IFIH1Q9BYX4 1025 aaKnown RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 SUGCTQ9HAC7 445 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 LIG3P49916 1009 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 ITGB3BPQ13352 177 aaPredicted RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 RSRC2Q7L4I2 434 aaKnown RBP21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 CCDC170Q8IYT3 715 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 RNF217Q8TC41 542 aa21.21■□□□□ 0.99
LAPTM4B-204ENST00000619747 ASTN1O14525 1302 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 TESPA1A2RU30 521 aaPredicted RBP21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 SORBS3O60504 671 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 NR3C1P04150 777 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 RAPGEF1Q13905 1077 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 ODR4Q5SWX8 454 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 RDH13Q8NBN7 331 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 PARVGQ9HBI0 331 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 PPP1R9AQ9ULJ8 1098 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 ATP9AO75110 1047 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 SCP2P22307 547 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 RPS12P25398 132 aaKnown RBP21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 KIF5AQ12840 1032 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 EDRF1Q3B7T1 1238 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 RPAINQ86UA6 219 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 NACC1Q96RE7 527 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 MLXIPQ9HAP2 919 aa21.2■□□□□ 0.98
LAPTM4B-204ENST00000619747 HNRNPH1P31943 449 aaKnown RBP21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 MTMR1Q13613 665 aa21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 TKFCQ3LXA3 575 aa21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 FBXW10Q5XX13 1052 aa21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 PDXDC1Q6P996 788 aa21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.19■□□□□ 0.98
LAPTM4B-204ENST00000619747 SRGAP1Q7Z6B7 1085 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms