RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PRRT2Q7Z6L0 340 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-206ENST00000619300 PROCA1Q8NCQ7 364 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-206ENST00000619300 NEK11Q8NG66 645 aa20.96■□□□□ 0.95
PSPC1-206ENST00000619300 ATRIPQ8WXE1 791 aa20.96■□□□□ 0.95
PSPC1-206ENST00000619300 WDR24Q96S15 920 aa20.96■□□□□ 0.95
PSPC1-206ENST00000619300 MOV10L1Q9BXT6 1211 aaKnown RBP20.96■□□□□ 0.95
PSPC1-206ENST00000619300 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
PSPC1-206ENST00000619300 CXCL11O14625 94 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 CASQ1P31415 396 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 NFIL3Q16649 462 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 OTUD5Q96G74 571 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 CDHR1Q96JP9 859 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 PCDHA10Q9Y5I2 948 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 SLC16A3O15427 465 aaKnown RBP20.95■□□□□ 0.94
PSPC1-206ENST00000619300 AKAP3O75969 853 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 KCNA2P16389 499 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 PPP2R3AQ06190 1150 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 KCNH2Q12809 1159 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 CCDC170Q8IYT3 715 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 CLMNQ96JQ2 1002 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 IWS1Q96ST2 819 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 NHEJ1Q9H9Q4 299 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-206ENST00000619300 METTL14Q9HCE5 456 aaKnown RBP20.95■□□□□ 0.94
PSPC1-206ENST00000619300 ANKEF1Q9NU02 776 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 BTBD7Q9P203 1132 aa20.95■□□□□ 0.94
PSPC1-206ENST00000619300 CLIC2O15247 247 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 RIOX2Q8IUF8 465 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 ANKRD35Q8N283 1001 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 STRA6Q9BX79 667 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 LARSQ9P2J5 1176 aaKnown RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 FBXO40Q9UH90 709 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 REXO2Q9Y3B8 237 aaKnown RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 WDR90Q96KV7 1748 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 ZMYM2Q9UBW7 1377 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 SPDYE5A6NIY4 337 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 SPATA31C2B4DYI2 1134 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 KIF5CO60282 957 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 SLU7O95391 586 aaKnown RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 EPB41P11171 864 aaKnown RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 CYLC1P35663 651 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 TTLL12Q14166 644 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 GNPTABQ3T906 1256 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 ARHGAP29Q52LW3 1261 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 MOB2Q70IA6 237 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 MAEAQ7L5Y9 396 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 DNERQ8NFT8 737 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 BAP1Q92560 729 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 CCDC43Q96MW1 224 aaKnown RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 TIPINQ9BVW5 301 aa20.94■□□□□ 0.94
PSPC1-206ENST00000619300 IRX2Q9BZI1 471 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-206ENST00000619300 MAPTP10636 758 aaKnown RBP20.93■□□□□ 0.94
PSPC1-206ENST00000619300 RRAGAQ7L523 313 aa20.93■□□□□ 0.94
PSPC1-206ENST00000619300 KSR1Q8IVT5 923 aa20.93■□□□□ 0.94
PSPC1-206ENST00000619300 SMAP1Q8IYB5 467 aaPredicted RBP20.93■□□□□ 0.94
PSPC1-206ENST00000619300 NFASCO94856 1347 aa20.93■□□□□ 0.94
PSPC1-206ENST00000619300 PEX10O60683 326 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 PPP1R37O75864 691 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 XRCC5P13010 732 aaKnown RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 ARHGAP25P42331 645 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 CASP4P49662 377 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 KRT83P78385 493 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 IRX3P78415 501 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 UTP14CQ5TAP6 766 aaKnown RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 HS2ST1Q7LGA3 356 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 CACNA2D4Q7Z3S7 1137 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 GBP3Q9H0R5 595 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 IKZF4Q9H2S9 585 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 ZNF215Q9UL58 517 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 PFASO15067 1338 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 PAPPA2Q9BXP8 1791 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 TMEM150BA6NC51 233 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 BACH1O14867 736 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 URI1O94763 535 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 NOL4O94818 638 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 PLS3P13797 630 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 STXBP2Q15833 593 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 XKR9Q5GH70 373 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 GOLGA5Q8TBA6 731 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 CRACR2AQ9BSW2 395 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 LSM14BQ9BX40 385 aaKnown RBP20.92■□□□□ 0.94
PSPC1-206ENST00000619300 SPATC1LQ9H0A9 340 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 CEP72Q9P209 647 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 KCNH4Q9UQ05 1017 aa20.92■□□□□ 0.94
PSPC1-206ENST00000619300 LRRC53A6NM62 1247 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 EIF3CLB5ME19 914 aaKnown RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 EIF3JO75822 258 aaKnown RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 AFPP02771 609 aaKnown RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 CNTN2Q02246 1040 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 ALCAMQ13740 583 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 BORCS6Q96GS4 357 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 EIF3CQ99613 913 aaKnown RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 SH2D3AQ9BRG2 576 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 ASCC2Q9H1I8 757 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 JPH1Q9HDC5 661 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-206ENST00000619300 LOXHD1Q8IVV2 1947 aa20.91■□□□□ 0.94
PSPC1-206ENST00000619300 GLTPD2A6NH11 291 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 ABL1P00519 1130 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 PSAPP07602 524 aa20.9■□□□□ 0.94
PSPC1-206ENST00000619300 PSMC2P35998 433 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms