RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TDP2O95551 362 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 SH3BGRP55822 239 aaPredicted RBP13.25□□□□□ -0.29
SRRT-216ENST00000618262 CAP1Q01518 475 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 SP4Q02446 784 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 POSTNQ15063 836 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 RNF207Q6ZRF8 634 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
SRRT-216ENST00000618262 RGL1Q9NZL6 768 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
SRRT-216ENST00000618262 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 TOB1P50616 345 aaPredicted RBP13.24□□□□□ -0.29
SRRT-216ENST00000618262 SCNN1BP51168 640 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 KIAA0753Q2KHM9 967 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 TMCO3Q6UWJ1 677 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 TRPM7Q96QT4 1865 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 ABCB11O95342 1321 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 CHUKO15111 745 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 ERLIN1O75477 346 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 TRIM21P19474 475 aaKnown RBP13.24□□□□□ -0.29
SRRT-216ENST00000618262 NOGQ13253 232 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 LCA5Q86VQ0 697 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 CHCHD4Q8N4Q1 142 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 DDX12PQ92771 950 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 KCNF1Q9H3M0 494 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
SRRT-216ENST00000618262 MYO6Q9UM54 1294 aa13.24□□□□□ -0.29
SRRT-216ENST00000618262 A0A087WWV3 80 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 GCOM1H8Y6P7 765 aaPredicted RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 HIP1RO75146 1068 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 MSL3P1P0C860 447 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 POLR2MP0CAP2 368 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 GNA11P29992 359 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 PABPC4Q13310 644 aaKnown RBP eCLIP13.23□□□□□ -0.295e-7■■□□□ 13.1
SRRT-216ENST00000618262 SMUG1Q53HV7 270 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 CDCA2Q69YH5 1023 aaPredicted RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 PEX5LQ8IYB4 626 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 HDAC7Q8WUI4 952 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 PTPRFP10586 1907 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 GRIN1Q05586 938 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 NEK10Q6ZWH5 1172 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 CEP57L1Q8IYX8 460 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 RASSF10A6NK89 507 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 DDX39AO00148 427 aaKnown RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 SEPT14Q6ZU15 432 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 RMDN3Q96TC7 470 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
SRRT-216ENST00000618262 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
SRRT-216ENST00000618262 SKAP2O75563 359 aaPredicted RBP13.22□□□□□ -0.29
SRRT-216ENST00000618262 CTGFP29279 349 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 ZNF76P36508 570 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 RCN1Q15293 331 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
SRRT-216ENST00000618262 CENPTQ96BT3 561 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 CABS1Q96KC9 395 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 BCAS3Q9H6U6 928 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 SLC26A4O43511 780 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 OPA1O60313 960 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 MTA2O94776 668 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 CYP2B6P20813 491 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 PRR16Q569H4 304 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 RUFY1Q96T51 708 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 PLIN2Q99541 437 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
SRRT-216ENST00000618262 KIAA1522Q9P206 1035 aaPredicted RBP13.22□□□□□ -0.29
SRRT-216ENST00000618262 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 SLC37A4O43826 429 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 SLU7O95391 586 aaKnown RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 RPSAP08865 295 aaKnown RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 GIMAP1Q8WWP7 306 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 EPAS1Q99814 870 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.291e-8■■■■■ 28.4
SRRT-216ENST00000618262 ME1P48163 572 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 EIF2B5Q13144 721 aaKnown RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 SPDL1Q96EA4 605 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms