RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
PDPN-211ENST00000617617 STAT5BP51692 787 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 MAPK7Q13164 816 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 STRA6Q9BX79 667 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 A6NJR5 290 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 DGAT1O75907 488 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
PDPN-211ENST00000617617 HSPA6P17066 643 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 ABCD1P33897 745 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 MYL5Q02045 173 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
PDPN-211ENST00000617617 STIM1Q13586 685 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 ALCAMQ13740 583 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 MFSD14CQ5VZR4 134 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 SCN10AQ9Y5Y9 1956 aa13.02□□□□□ -0.32
PDPN-211ENST00000617617 KIF20AO95235 890 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 PRCPP42785 496 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
PDPN-211ENST00000617617 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 DHX33Q9H6R0 707 aaKnown RBP13.02□□□□□ -0.33
PDPN-211ENST00000617617 GABRQQ9UN88 632 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.33
PDPN-211ENST00000617617 BACH1O14867 736 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 FKTNO75072 461 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 CYP2B6P20813 491 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 FLT3LGP49771 235 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 GRM1Q13255 1194 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 CCL14Q16627 93 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 NFIL3Q16649 462 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 MAP3K21Q5TCX8 1036 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 DYMQ7RTS9 669 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 FIZ1Q96SL8 496 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 HSD3B7Q9H2F3 369 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
PDPN-211ENST00000617617 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
PDPN-211ENST00000617617 ZBTB39O15060 712 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 MMP3P08254 477 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 CAP1Q01518 475 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 STK4Q13043 487 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 DAW1Q8N136 415 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
PDPN-211ENST00000617617 TRIB2Q92519 343 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 MED15Q96RN5 788 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
PDPN-211ENST00000617617 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 IGKV6-21A0A0C4DH24 114 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 PSMA7O14818 248 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 KPNA6O60684 536 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
PDPN-211ENST00000617617 TRPA1O75762 1119 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 PPP1R37O75864 691 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 AKR1A1P14550 325 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 ZNF18P17022 549 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 PRKCZQ05513 592 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 PAK1Q13153 545 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 COPS5Q92905 334 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
PDPN-211ENST00000617617 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
PDPN-211ENST00000617617 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
PDPN-211ENST00000617617 BICDL2A1A5D9 508 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ADCY6O43306 1168 aa13□□□□□ -0.33
PDPN-211ENST00000617617 HBP1O60381 514 aa13□□□□□ -0.33
PDPN-211ENST00000617617 DUSP11O75319 330 aaKnown RBP13□□□□□ -0.33
PDPN-211ENST00000617617 SSBP05455 408 aaKnown RBP eCLIP13□□□□□ -0.33
PDPN-211ENST00000617617 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
PDPN-211ENST00000617617 CCNE1P24864 410 aa13□□□□□ -0.33
PDPN-211ENST00000617617 PLCB4Q15147 1175 aa13□□□□□ -0.33
PDPN-211ENST00000617617 XKR9Q5GH70 373 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
PDPN-211ENST00000617617 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
PDPN-211ENST00000617617 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
PDPN-211ENST00000617617 C16orf70Q9BSU1 422 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
PDPN-211ENST00000617617 A0A087WWV3 80 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
PDPN-211ENST00000617617 LGALS2P05162 132 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms